fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G05930 Domain of unknown function (DUF313) (.1)

>AT1G05930.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 187
StyI C|C[AT][AT]GG 400


Click here to view TAIR data

>AT1G05930.1 length:957
ATGACGACAA ACGACGATGA TCACGCGGCT GAGAGAAACA CGATGTCCAT 
50
GAACTATGAA TTGGCGGCTA CGTTGAGTGA TGAAGAACAA CGCGCAAGAA 
100
AAGGAAAAGC CAAGATTGTC TGTAAAGAAG AAGACCACGT CTTTATCAAA 
150
AAGAAAGAAA AATACGAGGA AGAGAGCGAG AAGAGGGAAT TCTTCAGTCA 
200
TGTCCCCAGA AAGATAAGGC CTGCGCTTAG ATACCCACAA CCTAACTTTG 
250
AAAACCCTAA TGGGGCTTCT TCTTCTTTAA ACTTACCCTT CGAAGAAGAC 
300
TACTACATGG CTGAGTACTA CAAGAAGACG GAGACCATAA ACCCACCTAA 
350
CCCTTATCAC CAATGGTCTC CTTCTTCGTT CTTAACGGAG TACACACACC 
400
CTAGGATGCT TGAGGTGTTA CATCGCTGTG GATTCAACAG ACCAGTGGTA 
450
ACTTGTTATT CAAGGACGGC CAGGGAGATG CGGTGGTGGC TTCGCCAGGT 
500
GATGAAAGAC ATGAGAGCAG AAGACCTAAC ACTTATCTTA GAGAAGACTC 
550
TGTCCACAAC TGATGTGATC ACAACGACAC ATGGCCGTTT CTCAATGCAT 
600
TTCAACAGAT TAATCAGTAA CGACTTCTTG AAGCCTGAGG AGCGGAGTAT 
650
CCTAGAAGAA GATACCTACA ATGATGAGAC GATGGGAGTT GGAGCCATTC 
700
TCGTGGATCA AAGGTCTCAA AAGTGGAGTG TGATTTTGAA GAGATGGGGC 
750
CAGAATTACT TTCTGAGTTG TGGCTGGAAC GACGTTGTTA AGGCTAATAA 
800
ATTGAAAGCT GGCGACGACA TCTGTCTTTG GGCGTTTAGG TGCGATGGAG 
850
TCCTCTGTTT TGCCATGAGG CAGTGGCGTG GAATCCTCTG TTTTGCTCTT 
900
GTTCCTCCTC TTACATTGAG ACAGAGTAGC TCTTCCAATG CTCGCCGTCT 
950
CTGCTAA
1000

>AT1G05930.1 longest ORF length:318
MTTNDDDHAA ERNTMSMNYE LAATLSDEEQ RARKGKAKIV CKEEDHVFIK 
50
KKEKYEEESE KREFFSHVPR KIRPALRYPQ PNFENPNGAS SSLNLPFEED 
100
YYMAEYYKKT ETINPPNPYH QWSPSSFLTE YTHPRMLEVL HRCGFNRPVV 
150
TCYSRTAREM RWWLRQVMKD MRAEDLTLIL EKTLSTTDVI TTTHGRFSMH 
200
FNRLISNDFL KPEERSILEE DTYNDETMGV GAILVDQRSQ KWSVILKRWG 
250
QNYFLSCGWN DVVKANKLKA GDDICLWAFR CDGVLCFAMR QWRGILCFAL 
300
VPPLTLRQSS SSNARRLC
350