fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06040 BBX24, STO SALT TOLERANCE, B-box domain protein 24, B-box zinc finger family protein (.1.2)

>AT1G06040.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 172
NheI G|CTAGC 115
PstI CTGCA|G 593
PvuII CAG|CTG 596
SacI GAGCT|C 218


Click here to view TAIR data

>AT1G06040.1 length:747
ATGAAGATAC AGTGTGATGT GTGTGAGAAA GCTCCGGCGA CGGTGATTTG 
50
TTGCGCCGAC GAAGCTGCTC TCTGTCCTCA ATGCGACATC GAGATTCACG 
100
CCGCTAACAA ACTCGCTAGC AAGCACCAAC GTCTTCATCT TAATTCCCTC 
150
TCCACCAAAT TCCCTCGTTG CGATATCTGC CAAGAGAAGG CAGCTTTCAT 
200
TTTCTGTGTA GAGGATAGAG CTCTGCTTTG CAGGGACTGC GATGAATCCA 
250
TCCACGTGGC TAATTCTCGA TCTGCTAATC ACCAGAGGTT CTTAGCCACT 
300
GGGATCAAAG TAGCTCTGAC CTCAACTATA TGTAGTAAAG AAATTGAGAA 
350
GAATCAACCT GAGCCTTCCA ACAACCAACA GAAGGCTAAT CAGATTCCTG 
400
CTAAATCCAC AAGCCAGCAG CAACAACAAC CTTCTTCTGC TACTCCACTT 
450
CCCTGGGCTG TTGACGATTT CTTTCACTTC TCTGATATTG AATCCACCGA 
500
CAAGAAAGGA CAGCTTGATC TTGGGGCAGG GGAGTTGGAT TGGTTTTCAG 
550
ACATGGGATT CTTCGGTGAT CAGATTAATG ACAAGGCTCT TCCTGCAGCT 
600
GAAGTTCCTG AGCTTTCTGT TTCGCATTTA GGTCATGTTC ATTCATACAA 
650
ACCTATGAAG TCAAATGTTT CACACAAGAA GCCGAGGTTT GAGACCAGAT 
700
ATGATGATGA TGATGAGGAA CACTTCATTG TCCCTGATCT TGGCTAA
750

>AT1G06040.1 longest ORF length:248
MKIQCDVCEK APATVICCAD EAALCPQCDI EIHAANKLAS KHQRLHLNSL 
50
STKFPRCDIC QEKAAFIFCV EDRALLCRDC DESIHVANSR SANHQRFLAT 
100
GIKVALTSTI CSKEIEKNQP EPSNNQQKAN QIPAKSTSQQ QQQPSSATPL 
150
PWAVDDFFHF SDIESTDKKG QLDLGAGELD WFSDMGFFGD QINDKALPAA 
200
EVPELSVSHL GHVHSYKPMK SNVSHKKPRF ETRYDDDDEE HFIVPDLG
250