Locus |
Common name |
Short description |
AT1G06040 |
BBX24, STO |
SALT TOLERANCE, B-box domain protein 24, B-box zinc finger family protein (.1.2) |
>AT1G06040.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
172 |
NheI
| G|CTAGC |
115 |
PstI
| CTGCA|G |
593 |
PvuII
| CAG|CTG |
596 |
SacI
| GAGCT|C |
218 |
Click here to view TAIR data
>AT1G06040.1 length:747
ATGAAGATAC AGTGTGATGT GTGTGAGAAA GCTCCGGCGA CGGTGATTTG | 50 |
TTGCGCCGAC GAAGCTGCTC TCTGTCCTCA ATGCGACATC GAGATTCACG | 100 |
CCGCTAACAA ACTCGCTAGC AAGCACCAAC GTCTTCATCT TAATTCCCTC | 150 |
TCCACCAAAT TCCCTCGTTG CGATATCTGC CAAGAGAAGG CAGCTTTCAT | 200 |
TTTCTGTGTA GAGGATAGAG CTCTGCTTTG CAGGGACTGC GATGAATCCA | 250 |
TCCACGTGGC TAATTCTCGA TCTGCTAATC ACCAGAGGTT CTTAGCCACT | 300 |
GGGATCAAAG TAGCTCTGAC CTCAACTATA TGTAGTAAAG AAATTGAGAA | 350 |
GAATCAACCT GAGCCTTCCA ACAACCAACA GAAGGCTAAT CAGATTCCTG | 400 |
CTAAATCCAC AAGCCAGCAG CAACAACAAC CTTCTTCTGC TACTCCACTT | 450 |
CCCTGGGCTG TTGACGATTT CTTTCACTTC TCTGATATTG AATCCACCGA | 500 |
CAAGAAAGGA CAGCTTGATC TTGGGGCAGG GGAGTTGGAT TGGTTTTCAG | 550 |
ACATGGGATT CTTCGGTGAT CAGATTAATG ACAAGGCTCT TCCTGCAGCT | 600 |
GAAGTTCCTG AGCTTTCTGT TTCGCATTTA GGTCATGTTC ATTCATACAA | 650 |
ACCTATGAAG TCAAATGTTT CACACAAGAA GCCGAGGTTT GAGACCAGAT | 700 |
ATGATGATGA TGATGAGGAA CACTTCATTG TCCCTGATCT TGGCTAA | 750 |
>AT1G06040.1 longest ORF length:248
MKIQCDVCEK APATVICCAD EAALCPQCDI EIHAANKLAS KHQRLHLNSL | 50 |
STKFPRCDIC QEKAAFIFCV EDRALLCRDC DESIHVANSR SANHQRFLAT | 100 |
GIKVALTSTI CSKEIEKNQP EPSNNQQKAN QIPAKSTSQQ QQQPSSATPL | 150 |
PWAVDDFFHF SDIESTDKKG QLDLGAGELD WFSDMGFFGD QINDKALPAA | 200 |
EVPELSVSHL GHVHSYKPMK SNVSHKKPRF ETRYDDDDEE HFIVPDLG | 250 |
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