fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G08465 YAB2 YABBY2, Plant-specific transcription factor YABBY family protein (.1)

>AT1G08465.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRV, HpaI, NheI, NotI, PacI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 5729
BglII A|GATCT 3040, 5066, 6412
EcoRI G|AATTC 1367, 2001, 3446, 3564, 5949, 7308
HindIII A|AGCTT 2932, 5875, 6944, 9172
KpnI GGTAC|C 5797
NcoI C|CATGG 1253, 1484, 2181, 2440, 8594
NdeI CA|TATG 1267, 1476, 2484, 5807
PstI CTGCA|G 1633, 2348, 4261
PvuII CAG|CTG 1210, 1429, 1854, 5118, 8998
SacI GAGCT|C 6185
SpeI A|CTAGT 2833
StyI C|C[AT][AT]GG 1253, 1484, 2181, 2440, 8594
XhoI C|TCGAG 1996


Click here to view TAIR data

>AT1G08465 genomic sequence (4220-4288,6290-6421,6507-6627,6741-6789,6866-6941,7462-7569,) length:9468
tcacttcatc atggttactg aaaaattgtg cttgggcctt tatagcaaag 
50
cagaatgttg actcagtgtc gtttggttta gttacaatat tgcccctaag 
100
gtttggattt ttcttttttt ctctatgttg tttttctcaa gtcgtcgtcg 
150
cagtgtggag tggactgaag aatattcaaa gtcgtttatc atcgtaagaa 
200
atggggcaaa actggtctca aataataatt gctatgtttc ttgctctaat 
250
ctcttatatt gccattatga tttataacaa atcttgttct aactaaatct 
300
agccgaatgt tttgtacatg atacttgtag ccaaatgttt tttatacgaa 
350
tatgaatcat aaataaattc aattatattt tctttatttt atgagagcga 
400
agaatatatt ttttttgtag tcaaaaaata aaggttctac aataattaaa 
450
tgtgggataa cgaaatccaa aaagctccaa tctaaaacag tacaacatgt 
500
cattaacagc atgttcagtc caggcccaat aagcacgaaa tttctcttct 
550
ccgaaattaa cttaatcctt gagtttattt ggaaaagaca tttatacccc 
600
ttgttatctc aatggttaga gaacacgtgt gttgcgcgtg agcatcctcc 
650
attattacac caccgttggc ctccgacgac ggctcaagcc tatcttcgtc 
700
gccggcttct ccgATGGTTA CCAATCGCGT AGACGTCTTC TGGCACGAAG 
750
GAATGCTCCG ACACGACGCC GTAGAAGGCG TCTTCGACAC TGGATACGAC 
800
CCTGGATTCC TCGACGTATT GGAGAAGCAC CCGGAGAACG CCGATCGCGT 
850
CAGGAACATG CTTTCGATTC TCCGACGCGG TCCCATCGCT CCTCATGTCA 
900
ATTGGTTTAC CGGTCTTCCA GCAATCGTTT CGGAGCTTCT AATGTTTCAC 
950
ACTTCAGgta catcgctcta aggttcgcag aaaagaagga acttttataa 
1000
aaacctgttt ctgaatttgg tagttttgac aaatcttaac cttaaaaaat 
1050
tcgactttga tttgtgatta ttgctttctc atgtaatcca ttgtgatcct 
1100
tgtacagAGT ACATTGAGAA GCTAGTGGAG GCAGATAAAT CAGGAGAAAG 
1150
GTGTGAAATT GCCGCAGGTA CTTTCATGAG CCCAGGCTCG TGGGAAGCTG 
1200
CTCTTCTTGC AGCTGGAACA ACTCTTTCAG CAATGCAACA TATTCTTGAT 
1250
TGCCATGGGA AAATTGCATA TGCTCTGGTA CGCCCACCAG GTCACCACTC 
1300
ACAGCCTACT CAGGCTGATG GGTATTGCTT CCTCAACAAC GCTGCTCTTG 
1350
CTGTCAAGCT GGCATTGAAT TCGGGTTCTT GTTCCCGAGT TGCGGTTATT 
1400
GACATCGATG TACATTATGG AAATGGCACA GCTGAAGGGT TTTATACATC 
1450
TGATAAGGTT CTTACGGTGT CACTCCATAT GAACCATGGA TCATGGGGAT 
1500
CGTCCCACCC GCAGAAAGGG TCGATTGATG AACTTGGTGA AGACGTGGGA 
1550
TTGGGTTACA ATCTGAATGT CCCTTTACCG AATGGCACGG GTGACCGGGG 
1600
ATATGAATAT GCCATGAATG AGCTGGTGGT TCCTGCAGTT AGAAGGTTTG 
1650
GACCCGATAT GGTTGTTCTC GTTGTTGGTC AAGACTCTAG CGCTgtaagt 
1700
tctttctttg cccaaatacg tgtagactat ctgactgagc acttactcag 
1750
ggttttgttc gcaattattg ttttggttac aagtaaatcg cttatgtatg 
1800
ctgctccaat atggctctgc tgtgataagt ctgcataagt agttagaaga 
1850
gtgcagctgt tgcattagtc atgtcatctc tctaatattc agtcagcaaa 
1900
agataaacga atcagtataa atggaagatg accaaaggag gaatgggttg 
1950
tctagggatt tgggtattgg ttttgcattg gaagagtcta gggtgctcga 
2000
gaattcacca taagattata tctttggatt ctttgcttca gtttgcattc 
2050
ttattcagag aggaataaag gaagatatgg tttttatggt tcttattacg 
2100
ctacctagtg gtccccttgt cgagcttagt gaatttatat tcagcacaga 
2150
tgttactaac agagctgttc actttttggc ccatggaagt taatgaattt 
2200
tctggttcac aggaaactct ctcttaaagt tctccggctt aaatccatta 
2250
gtttggtttc aaacatttgc tagggatgct gattgtctag tttgtgaggg 
2300
gatttgaatg tcatggactg acggataacc actatttact gtcggatctg 
2350
cagTTTGATC CAAACGGGAG ACAAAGCCTG ACAATGAATG GATACAGAAG 
2400
GATTGGGCAG ATAATGAGGG GAGTTGCAGA GGAGCACAGC CATGGAAGGT 
2450
TGCTTATGGT GCAAGAAGGC GGGTATCATG TAACATATGC AGCTTACTGC 
2500
CTCCACGCCA TGCTCGAAGG GGTGCTGAAG ATTCCAGAAC CGCATCTATC 
2550
TGATCCGATC GCTTATTATC CCGAAGAAGA AGCTAATGCT GTTGCTGCTG 
2600
TGGAGTCAAT CAAAACATAT CACACCGAAT TTGTTCCATT TCTCAGAGGA 
2650
ACTTGAaaat gggacgtatg aatgagttta tgttattcct cgttgtcttg 
2700
tgaccttttg gaacacagat ccaaatcaat caggtcaaac cgtatatatc 
2750
aaaatacttg ttgatcaaac tatcttttgt atgaaaactt attcacacga 
2800
tccgactttg ttttttgagt ttttttttaa caactagtta ggtttagact 
2850
agaagaaccc aaattttttg tgacagaata ataattttgc agaaagagat 
2900
tttataaata tattccagat acaatcaaat caagcttgga aataagattg 
2950
gcattgtcgt gagtatcact gtagagagaa tagctcgcgg gtccgtaaaa 
3000
aatgcatgtc aacctcgatc gtggaaatat gtcaggataa gatctgtatt 
3050
ctcgtctcta tgatttgttc gaaagaaact tgtttatatg aatcattttg 
3100
taagaaatgt ttgttgcatt gattccaaat actttagatg tgttcaatta 
3150
gtttattcgc tttatttttt attttatttt tggtaaaagg ttaataaaga 
3200
caaaatagga aattgcattg caaatacaaa tacaaataca aaacaatgaa 
3250
acatctatat tatgaaataa attattaaaa attaaaccag taataaatgt 
3300
cgttttgttg atccacactc aatctaaaat gtacatctat gttcacttgc 
3350
agaatgaatg ggattttaat gaactttaaa aactcaattt caagtaatta 
3400
caccaatcca atgaacatgt ttaagtttgc agaaaatgcc aaaatgaatt 
3450
catctttcgt tttatactgt taatcactta ttcacaaaat agaccatcat 
3500
tgtcacttgc aatatgtttt atttgattct gaagaggatt atgtatcgtt 
3550
ttcaattgtc cctgaattca caaactgtat cgttttacta aatttactgt 
3600
tgctgctaac aaagtccatg tatcgttttc agatatgtgt ttgaaaaaac 
3650
aaaatttaat cgaactgtta atctcatttc ttatctgcta gacaaataca 
3700
atacacattc tcatgatcta gtactattca ttgtaaaatg actgtaacaa 
3750
taagattata tattgagcta ctagcctact acttatccta taaaaatgta 
3800
attgaaatta acttatttgg tgataggact atatatctta actaaagatg 
3850
aaaaaacaat aaaaataaca aagggaaatc ttcactttat tatggagtaa 
3900
tagaactctc taattatcta aggaaaaaaa aatgcaagta ccgaaaaata 
3950
aaaaagagga acattgtagt atagtcccca cttgtctctc ttcgtctcca 
4000
aataaaccac attagtcttt tcagattttt tgtacacttc cttcatcccc 
4050
cacccatctc tctctctctc tctcatcctt cctctttctt ctttgcttgc 
4100
ccttttcttt ttattttatt cttccaaaat caaatagttc cttctttgat 
4150
ctcattggga taactaaaag tttcaagaag agaaacatat cattgaagag 
4200
agaacccaca caaaaaaaaA TGTCTGTAGA TTTCTCATCT GAGCGTGTTT 
4250
GCTATGTCCA CTGCAGCTTC TGCACCACGA TTTTAGCGgt aatctccctc 
4300
tcctctttat attgtaaatc tttctcaaaa gaaagagtgt taatttggta 
4350
cttactctga gctagatccc cttttctcta acttaaatca aactgttata 
4400
taagatatat attatttacc tatcaaagat ggttggtgat atatctatat 
4450
gtgtattgca tgatgaattt tgcatctagt tcatagatca acatatatct 
4500
tttctgtgat taattattga tgaagatata tataccggaa agtttcttaa 
4550
atttcagaaa ccctaaatct tattcctttt ttttcttcta taacgcgtga 
4600
tgagatacct aaaagaagca aaagaagttc ggtagttgaa acataaattt 
4650
tagtgctcaa acaaagtaaa ctcaaaggaa acagctcctg atcagattta 
4700
gggctctatg agtaggtttt aagtctacaa agataacttc ttctttccct 
4750
atttttacta tttaaagaat ttttattttt attttcgttt taaggacatt 
4800
ttttcttctt ctctttacaa gtaaatcctt cattttttac tcttgtatat 
4850
tcatattttc tttggtgtta gttccctaag tttcaacagc cattaatatt 
4900
ttctgtaaaa ggaatttggt agatagcatc catgtgatgc agtctcaaaa 
4950
ttaaactttc actagggtct tccaccttta tagtctgact tcatactatc 
5000
taatcttttg atatgtataa ctgtagtatg tgacacatgt attatactta 
5050
tatcatatca atcatagatc tttcatctac aagcgtggtc catgtaaaaa 
5100
tgtttacatc acatcaccag ctgattattt taaaatcatt ttttgggttc 
5150
tccaaaattc tctttttatg tttctcacag tgtgctgaag ctattttatt 
5200
acatgtatat gattttaaaa tttacttaaa acttcactaa ttatctccag 
5250
ctttatctaa cggttttatg tgacatttaa taatatccac agttcttccg 
5300
tacatttttg atatgtgtgt atcagtgata tacgtctatc tatatgtgtg 
5350
tgtatataaa ttattgatct atgatccata taattaagta atcatgagaa 
5400
actaactagc taggttatgt agcttaatgg tttagcgttt agacaaatta 
5450
aaaaaaaaaa agtttatcat gagaaactct tgtacactga tattattcat 
5500
aaacgttata ctacatatac ataaataatg gagatgtcgc acgagtctga 
5550
ttaggaacaa aaagggccat atttaataaa aatgttagag gtcttcttgc 
5600
acaaaatagg gtgtgtattg tagtggaaag tacaaaagat ttgttctacc 
5650
cagttccagc aacaatttct tgatctatac aaaagctgca aactgttaaa 
5700
tcatggccga tcttgaccac ttaggattgg atcctttctc tctctctctc 
5750
tctctcgctc acacacaaaa atataagacg attataataa aaagatggta 
5800
ccatcacata tgaaggactt tatgggctgt tgttaaggtc acgtcgtttt 
5850
ctaacatgac tgtcttctcc ttacaagctt catcaaccat tcttcatctc 
5900
tttactatct tttatcatgt tgccttgagg tcttgtgtgt cagacataga 
5950
attcatcaga acccaccaaa cagaaaaata catattcttt tatatatgtt 
6000
aaatttgatc atttgtttgt tcgaatatta gttgtggtaa tacttctata 
6050
aggttactat tttctatttc atgtgataaa aatctatagg actatcttta 
6100
cataggaaat aggaaatcta caattaacca aaaacaaggt gtgctatagc 
6150
ctataatgga gtagtactta acattctctc tcaagagctc tcgttacatt 
6200
agagaccagc cactcgaatt ataaaatagt gataaaacaa gacaattaac 
6250
gtgtccctta taatgatcaa gacatgtatg aatgattagG TAAGTGTACC 
6300
ATACGCAAGT TTGTTCACAC TTGTGACGGT GAGATGTGGC CATTGTACCA 
6350
ATTTGCTATC CCTCAACATT GGAGTTTCAC TTCATCAAAC CTCAGCTCCT 
6400
CCCATTCACC AAGATCTTCA Ggtatcatat tatattcatt agtccttcaa 
6450
catttttatt attcccattt agaaatctgg cttatatagt ttttgaaatc 
6500
atgaagCCTC ATAGACAGCA CACAACCTCT CTGGTGACAA GGAAAGATTG 
6550
TGCATCGTCT TCTAGGAGCA CCAACAATTT ATCGGAAAAC ATTGATCGTG 
6600
AGGCTCCTAG AATGCCTCCT ATTCGCCgta tgtctctcta tttacctctt 
6650
gcattccgta catagtattt aaagtttgtg taatatatgc aatcaccaag 
6700
ctaagtgagt ccataatttt cttttatttt catgtggcag CACCGGAGAA 
6750
AAGACAACGT GTTCCTTCGG CCTACAACAG ATTCATCAAg taagtgttaa 
6800
tcctttgatg aaatatacta attaactctt tcgctacaac tttaataaac 
6850
taaattgtta attagGGAGG AAATCCAAAG GATTAAGGCT TGCAATCCAG 
6900
AGATTAGCCA CCGTGAGGCA TTTAGCACTG CTGCTAAAAA Tgtaagcttc 
6950
cttctttacc attctttttc acaaggtaga ttgttgctaa gatagctcaa 
7000
aaaaaaaaaa aatccttatc gtagcttcat cgacgatgtc agaattatat 
7050
agaattagga agaagatgca aaaaaaaatg aaaaaaaaaa ataactaaag 
7100
ttataaagtc ttttaatact gtatttttag attcaataac tctgtaaaat 
7150
gtatttctta actatttaaa aaataaaata aattattatc tttttaaata 
7200
acctaacaag taaataaata aaaaatgata tacgaacaca tgattggata 
7250
gtagtttttt ttgtttgcaa taattagtac caactaattg aaataactgt 
7300
ggtgggagaa ttctagggct tggtcactct ctttgaaaat ataagtgtgt 
7350
atgtatacca ataagatagt ggttctacta tttataattg gtggaatgtt 
7400
tatatatcac agtattagat gttttttaaa aataaatttg cctttcaatt 
7450
tttgggtgta gTGGGCACAT TTTCCTCACA TTCACTTTGG ATTAAAGCTG 
7500
GATGGCAACA AGAAAGGCAA GCAATTAGAC CAGTCAGTTG CAGGCCAAAA 
7550
GTCTAATGGC TATTACTAAa gcctttatat atatacacac atatatacac 
7600
ttatacgtat atatatgtgt atagatatat atgcgtgtgt atgatttatg 
7650
tttatctttg tacgtacgca ttaatgaatg tgtaagcaga gagctgatga 
7700
tggaaagaga tcaggcgagg aagaagaaga tcatataacg ttacatatat 
7750
atacatgtat gtatatatgt tcctttcttt tttcttgcgt gtgcttcatc 
7800
tataacttca tttctagttt tattctccta ataagtgaag tctataaatt 
7850
tgaacctaaa atgtttagga agaatcttct ttctgaagat tgtaatataa 
7900
atttcaactt tactcattct gaaaaggtgt ggtcacgact ttatatatat 
7950
aatccctagt tttatggtaa ttattgttga taatacctga ggttaaaggg 
8000
ggatgtatgt ggaaattgat tgattcttta tcaatttcat ggatatatag 
8050
agtttgtgta tacatagaag cacatgtata tacatagagt gagtagtaaa 
8100
agatatataa attccatctt gggatataaa atggtaactt ttatggtgct 
8150
gagataattc tgaaactcac tcattccaaa gaaacattct ttgcaaaaag 
8200
caaaggcttc caatgaatag ttcacttggg ttgtttttaa tacttttttt 
8250
ttaatcaatg agaaatcaat gctcgtgtct tctcttgtca gccacaaaac 
8300
tcataatccg gttgagtatc atgattaata atatgtcaca cttttatgct 
8350
gctgatcggc tcactatttc aaagaaaatc ataagcagcg tgaaacggga 
8400
cggtctagtt ttggtcgata ccgttttaca tcaatgatgc gaatttgaca 
8450
aaaatataat tttttctcga cggtaggcac atttttatgg gggaaaaatg 
8500
gtacataatg agctattatt tgtctatgat atataactac cagttcggtc 
8550
gtgtattaat ttgcagtgat cgttatcaag attcgaatcg aaaccatggg 
8600
ttgttttaat aacatgggcg atttgacttt gtcaacgcat actcgttttg 
8650
tgaaactttt gtagtatgtg gtctacataa accatgcatt ctcttaaaag 
8700
ataaaatatt atcgtatatg aactctttta agtgactact gaatattata 
8750
agaaaaacgt tgtctctttt gattaaatgt aatgcagaat agcaattata 
8800
aaagtaatgc tatagatatt ttgttgtata gctgtggtca acttttgcta 
8850
aaagaatgcc actttggaaa aaatgactca agcatttaga ccaaatagca 
8900
atcactatag ttttcacgtc aacatcaaat ttctattcag tattacgtac 
8950
taattataac ttcattttct atttgtccaa aatggacact aactccgcag 
9000
ctggtggcta tgtttaatga taagcatctc gtagagatcg tatatccacc 
9050
actcccgacg aagggttaga gaagtggggt cgtctccaat gtgtgacaac 
9100
agtcttagag acacttacgt acaccttcca tcgtccatgc acaaatattt 
9150
taagaaaaca ggaaagtaga aaagctttgg atatatgatt ttgaattgag 
9200
ataggtataa atatagtagt aggagaggga gaggaagaga gggaagagat 
9250
gacattttta atgaagggtc caaaagaaaa acagaatctg aaacgtcaaa 
9300
tcatgttagt tgaggtcttt ggctgtttgt gcctctgacg ggtcttgtcc 
9350
acacacttta atgtttcctt ttctttcttt cttttttcac tgcctttttt 
9400
cttccttcat tattatgttt ttttgcttca atcttcatta ttaccgtttt 
9450
cattatcctt tgtttgtt
9500