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| Locus | Common name | Short description |
| AT1G09530 | PIF3, POC1, PAP3 | PHOTOCURRENT 1, PHYTOCHROME-ASSOCIATED PROTEIN 3, phytochrome interacting factor 3 (.1.2) |
>AT1G09530.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 510 |
| EcoRV | GAT|ATC | 114 |
| HindIII | A|AGCTT | 37, 1133 |
| HpaI | GTT|AAC | 1345 |
| NcoI | C|CATGG | 283 |
| PstI | CTGCA|G | 1031 |
| PvuII | CAG|CTG | 1268 |
| SpeI | A|CTAGT | 571 |
| StyI | C|C[AT][AT]GG | 283 |
| XbaI | T|CTAGA | 175 |
Click here to view TAIR data
>AT1G09530.2 length:1575
ATGCCTCTGT TTGAGCTTTT CAGGCTCACC AAAGCTAAGC TTGAATCTGC | 50 |
TCAAGACAGG AACCCTTCTC CACCTGTAGA TGAAGTTGTG GAGCTGGTGT | 100 |
GGGAAAATGG TCAGATATCA ACTCAAAGTC AGTCAAGTAG ATCGAGGAAC | 150 |
ATTCCTCCAC CACAAGCAAA CTCTTCTAGA GCTAGAGAGA TTGGAAATGG | 200 |
CTCAAAGACG ACTATGGTGG ACGAGATCCC TATGTCAGTG CCATCACTAA | 250 |
TGACGGGTTT GAGTCAAGAC GATGACTTTG TTCCATGGTT GAATCATCAT | 300 |
CCCTCCCTTG ATGGATATTG CTCTGATTTC TTGCGTGATG TGTCGTCTCC | 350 |
TGTTACTGTC AACGAGCAAG AGAGTGATAT GGCGGTAAAC CAAACTGCTT | 400 |
TCCCGTTGTT TCAGAGAAGA AAGGATGGCA ATGAATCAGC TCCTGCTGCT | 450 |
TCTTCGTCGC AGTATAACGG TTTCCAATCG CATTCTCTGT ATGGAAGTGA | 500 |
TAGAGCTAGA GATCTTCCTA GCCAACAAAC CAATCCGGAT CGGTTTACTC | 550 |
AGACGCAGGA ACCACTAATT ACTAGTAACA AGCCTAGTTT GGTCAACTTT | 600 |
TCACATTTCT TACGCCCTGC AACTTTTGCG AAGACTACTA ATAATAACCT | 650 |
TCATGACACT AAAGAAAAGA GTCCTCAAAG CCCGCCAAAT GTGTTTCAGA | 700 |
CCAGAGTTCT TGGAGCTAAA GACTCTGAAG ATAAGGTTCT TAACGAGTCT | 750 |
GTTGCTTCTG CTACGCCTAA AGATAACCAA AAGGCTTGCC TAATATCAGA | 800 |
GGACTCATGT AGAAAAGACC AAGAGAGTGA AAAAGCAGTT GTATGTTCTT | 850 |
CTGTTGGCTC GGGTAATAGT CTCGATGGCC CATCCGAAAG TCCTTCACTT | 900 |
TCTTTAAAGA GAAAGCATTC GAATATTCAA GACATTGACT GTCATAGTGA | 950 |
AGATGTGGAA GAAGAATCAG GAGATGGAAG AAAGGAAGCA GGTCCATCTC | 1000 |
GAACGGGTTT GGGTTCAAAG AGAAGCCGCT CTGCAGAAGT GCATAATCTG | 1050 |
TCTGAAAGGA GACGGCGTGA TAGGATCAAC GAGAAGATGC GTGCCCTGCA | 1100 |
AGAACTCATT CCAAACTGTA ACAAGGTGGA CAAAGCTTCG ATGCTAGATG | 1150 |
AAGCCATCGA GTATCTCAAG TCACTCCAAC TTCAAGTGCA GATCATGTCA | 1200 |
ATGGCGTCTG GTTACTATCT GCCACCGGCG GTTATGTTCC CACCGGGTAT | 1250 |
GGGGCATTAC CCGGCAGCAG CTGCTGCAAT GGCAATGGGT ATGGGAATGC | 1300 |
CTTATGCAAT GGGCTTGCCT GATTTGAGCC GTGGTGGTTC ATCGGTTAAC | 1350 |
CACGGACCAC AGTTCCAAGT CTCGGGGATG CAACAACAAC CAGTGGCGAT | 1400 |
GGGTATTCCA CGTGTCTCTG GTGGTGGTAT CTTTGCCGGT TCTTCGACGA | 1450 |
TTGGCAATGG CTCGACTAGA GATTTATCTG GTTCTAAAGA TCAAACAACG | 1500 |
ACGAATAACA ACAGTAACTT GAAACCAATA AAGAGAAAAC AGGGGTCTTC | 1550 |
TGATCAGTTT TGTGGATCGT CGTGA | 1600 |
>AT1G09530.2 longest ORF length:524
MPLFELFRLT KAKLESAQDR NPSPPVDEVV ELVWENGQIS TQSQSSRSRN | 50 |
IPPPQANSSR AREIGNGSKT TMVDEIPMSV PSLMTGLSQD DDFVPWLNHH | 100 |
PSLDGYCSDF LRDVSSPVTV NEQESDMAVN QTAFPLFQRR KDGNESAPAA | 150 |
SSSQYNGFQS HSLYGSDRAR DLPSQQTNPD RFTQTQEPLI TSNKPSLVNF | 200 |
SHFLRPATFA KTTNNNLHDT KEKSPQSPPN VFQTRVLGAK DSEDKVLNES | 250 |
VASATPKDNQ KACLISEDSC RKDQESEKAV VCSSVGSGNS LDGPSESPSL | 300 |
SLKRKHSNIQ DIDCHSEDVE EESGDGRKEA GPSRTGLGSK RSRSAEVHNL | 350 |
SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK SLQLQVQIMS | 400 |
MASGYYLPPA VMFPPGMGHY PAAAAAMAMG MGMPYAMGLP DLSRGGSSVN | 450 |
HGPQFQVSGM QQQPVAMGIP RVSGGGIFAG SSTIGNGSTR DLSGSKDQTT | 500 |
TNNNSNLKPI KRKQGSSDQF CGSS | 550 |