fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10585 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G10585.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 389


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>AT1G10585.1 length:546
ATGGGGAGAG CAAGAGAAAT AGGAGAAGGA AACTCATCGT CGTTAAGGGA 
50
ACAACGAAAC CTCAGAGAGA AGGATCGAAG GATGCGCATG AAACATCTCT 
100
TCTCTATACT TTCTTCTCAT GTTTCTCCCA CTCGCAAGTT ACCAGTGCCT 
150
CACCTTATAG ATCAAGCGAC ATCATACATG ATCCAATTGA AAGAGAATGT 
200
AAATTATTTG AAAGAGAAGA AAAGGACATT GTTACAAGGA GAACTCGGGA 
250
ATCTCTACGA AGGGTCGTTT CTTCTACCCA AACTCAGTAT TCGTTCGCGG 
300
GATTCGACCA TAGAAATGAA TCTGATCATG GATCTAAACA TGAAAAGAGT 
350
AATGTTACAC GAGCTTGTGA GTATTTTTGA AGAAGAAGGA GCTCAAGTAA 
400
TGAGTGCTAA TCTTCAGAAC TTGAATGATA GGACCACTTA CACAATCATA 
450
GCCCAGGCTA TCATTAGTCG GATTGGCATT GATCCATCAA GGATAGAAGA 
500
GAGAGTACGG AAAATCATCT ATGGATATAT ATATTTTGAA GCATGA
550

>AT1G10585.1 longest ORF length:181
MGRAREIGEG NSSSLREQRN LREKDRRMRM KHLFSILSSH VSPTRKLPVP 
50
HLIDQATSYM IQLKENVNYL KEKKRTLLQG ELGNLYEGSF LLPKLSIRSR 
100
DSTIEMNLIM DLNMKRVMLH ELVSIFEEEG AQVMSANLQN LNDRTTYTII 
150
AQAIISRIGI DPSRIEERVR KIIYGYIYFE A
200