fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10585 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G10585.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, NheI, NotI, PacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 2481, 5848
EcoRI G|AATTC 2861, 3442
HindIII A|AGCTT 1712, 4018, 6030
HpaI GTT|AAC 2578
KpnI GGTAC|C 4849
NcoI C|CATGG 6202
NdeI CA|TATG 1951, 4866
PstI CTGCA|G 6378
PvuII CAG|CTG 5687
SacI GAGCT|C 1740, 4782
SpeI A|CTAGT 2619
StyI C|C[AT][AT]GG 6202


Click here to view TAIR data

>AT1G10585 genomic sequence (4041-4178,4532-4849,4941-5030,) length:6704
ggctatgttg cgaaaatcct atggacatct tgattttaac cagatcaatc 
50
aaagaactga tcaagggata atcatcttga tttgaaccag atcaatcaaa 
100
gtgcagcatt tagctagggt tctcagtatt tagtacaagc cagctaggac 
150
cattatatgt agtgtagagt taaaacaaat gattcatatc tatatataca 
200
tttttgcagt cattttaaca aataaatcct ggacttagaa cttatttacg 
250
actcaatgcc actgaattta tttttttcaa tcgacatttt aaatcaaata 
300
tttacctaac aaaaatattg cctaaaatgt ctctatatta aatccaccat 
350
tacttcaaaa aaagtctaac attacttcaa aaaaatcatt cctaaaatct 
400
ctcttaagta tttattaatt ttcggtttta atttgctgca aaaaaaaaat 
450
cggttttaat agtacaaaat attttaaggt agaattttct ttccatattt 
500
atttaatatt tcgtttttac agcatttaat attttgttta taaataacaa 
550
attaattatt tagcattcaa gaaacttttt tctaatctat cctttaatta 
600
tattgacatt attgattgat ttttaaaata tatagagatt caaatcttcc 
650
atatatgttt atcatcttct aaggaaatta aacaattatt ttctgaatct 
700
aaactaaaat ttagaaaact aaataaataa ataaaatcgt tttaattatt 
750
ttctaagcta aactatatta cactatgatc tttagttttg aatcattcat 
800
tttcattgta atataaagaa tcaatctcat attttccgtg ttatacaaat 
850
aatcaatctc atattttcag ttagtaaaat gtacatgtat taaaacgtaa 
900
caaaatcatc gttctcaaaa ctatttcaaa tatattacaa tctcatatat 
950
cacgcagatt tcttcaaaat ttgaactaaa tgtcggtaac tatttataac 
1000
aaaaaatgtt tggcaaacca aaatacaatt gcaatccctt aaaatgagca 
1050
aaacgcactt aaatacattt ttttatcaat tcactaaatc ttatttctcc 
1100
aaaatttaaa ctagatttcg gcaactattt aaaacaaaaa ttgtttgaca 
1150
aactaaagta caattgtaat cccgtaaaat atttatttta attatatatt 
1200
taaatcaacg atgtactgta gttttttttt acgggacggg tttggcggga 
1250
cgggtttgaa aggacattac ttaataacag ttgtaaactg taaaataaat 
1300
atattttata gatagatata atttacgaac ttttatatat actaatttaa 
1350
aaaaacaatt gttcccgcgg tgtaccgcgg gttaaaatct agtatattac 
1400
attttagtta atacatataa cgattataac caaattcata caaaagacat 
1450
ggaagtaact aggttgtgtg tttttattgg caccaacagT TGCCAGTGCC 
1500
TCAACTTATA GATCAAGCGG TATCATACAT GATCCAACTG AAAGAGAAGG 
1550
TAAACTATTT GAATGAGATG AAAAGGAGAA TGTTAGGAGG AGAAGTCAAA 
1600
AATCGCTCTG AAGGGTCGTC TCTTCTGCCA AAACTCAGTA TTCGTTCACT 
1650
GGATTCGATC ATAGAAATGA ATCTGGTTAT GGATCTAAAC ATGAAAGGAG 
1700
TAATGTTACA CAAGCTTGTG AGTGTTTTTG AAGAAGAAGG AGCTCAAGTG 
1750
ATGAGTGCTA ATCTTCAGAA CTTGAATGAT AGGACCTTTT ATACAATCAT 
1800
AGCCCAGgta catgcatgtg tcatgttttt tttttttttt ttagcagcat 
1850
ctctttgttc catatcatta aaatatagtt tgaacttttt ttgaaggact 
1900
atatatatat gataaattaa taatcaccta aatgaatatt tgcagGCTAT 
1950
CATATGTCGG ATCGGGATTG ATCCATCAAG GATAGAAGAG AGATTAAGGG 
2000
ATATAATCTC ATGAttaatt ttttgaagca ttattgaatc ccaaatcaca 
2050
agtcttttct taacaaatta aatgtgttag ttctttaaac atgagattat 
2100
gagtattttt aagagtgaat tggtgtaata gccctattgt tgtttaagtt 
2150
aaagagaatg atcaaatgtc tgaataccat ttcctcaagt atatgaacga 
2200
aaaagcctct cacatcatct tcaaaatctc tttattttct cttttctttc 
2250
tatgcctaat ctctattacg tttatagaat ctcatgttta aatataaaat 
2300
atattatcta cttttattgt caagaactct caaattttct ttcattgagc 
2350
attttaagct caaatatttt attacaggcg ccgtctaaaa tagtcgtaat 
2400
tgatatttgc atacatagaa tagatagatg ttatgcatct gatgactatc 
2450
ttcaaaacat gttcaagggc ataggcattt ggatccactt ttggagtttt 
2500
tcatattgcg atagcaagga cattcatctt tgttttctcc taaaatcaca 
2550
catggttaga ttttgtatgt gaatatagtt aactaaaact taaaaaacat 
2600
gtatatatac acgacataac tagtaaacaa atcttttttt ctaaatgtct 
2650
tatataaatt ggacagtata tatagatcga taacaaaaat ttcgctacaa 
2700
attttctaac tataagtaat catccttttc tagccacaga attagttaca 
2750
agtaattata ggcttaacat tttaaaattg ggctaatctg tatttctagt 
2800
cacggatttt caatggctat gaattatgat agttaccaaa tgactattct 
2850
cttcttgtac gaattcaaat atttgaagaa ggaaaaaaag aataacatgt 
2900
ggaaaatgca ataaggatat aattgtccct tactcagttt ctaagcaagt 
2950
ggtcaagcag cgagacgata tatacacagt gttagtatca tattgcggct 
3000
ccttttactt tttatgtcag tttgctcagt ggcaaagtta tgaccaacat 
3050
ctacctggag tactccaaga ctcaacaaaa ctaggcatgt ttaattttct 
3100
gtctttgtat tcacctccgg tgaacgttta gacgatcggt ccatgtagat 
3150
cccctatccg gtgaacgatg tcggccatac ggccaaagag agttgagggc 
3200
ctttaataat ttatgtaagg aatgccgaat gtgttgtgtc cttttcttct 
3250
atgataatga tagcttgttg aataatctta ggttatggcg ccttatgata 
3300
ctttcctcgg ataatgaata cgtgcaccaa attaattgaa catgatgata 
3350
ctatttgatt tagtggtccc gattctatca gtatacaaaa caattttcct 
3400
tttctatttg ttgatagaaa catatatagt actgttgtaa ggaattcatt 
3450
tttgtctacc gtggctgttg actattttac gccattgaaa tgatttttga 
3500
taataatttt ctccaaacct actgtaaatc acaggactta aactcatggt 
3550
tagtaatctg aaagaagaag aatcatatct ctgaacgtta ggaatctcat 
3600
ctcacacggt aagcatgatg ctatctaaac tatgtctttg aacgttagaa 
3650
atcttacatc gaaattatga tgcgtcctag taatgtgtca acccaccaac 
3700
aaatctaatt ttttttttaa tgataaacaa catatctaat tgttttgaaa 
3750
cttttgtatc tttaagaacg tggaaattcc gaagtaaata gtaaaattta 
3800
cttggtagga aagatgcatg catcttatta atttagtgtg taagctcacg 
3850
gacgcaatca caaaagccat gactttcttc caaaacatcc ctttcatcta 
3900
aatcacgtag ctctttctct caaagttgag atttgtgact ctgtatctcc 
3950
cggccctctc tatctcttta actgtatata aagagagatg gatttgaaaa 
4000
gagaaacttg tacataaaag cttaaaagaa aacaaaaaga ATGGGGAGAG 
4050
CAAGAGAAAT AGGAGAAGGA AACTCATCGT CGTTAAGGGA ACAACGAAAC 
4100
CTCAGAGAGA AGGATCGAAG GATGCGCATG AAACATCTCT TCTCTATACT 
4150
TTCTTCTCAT GTTTCTCCCA CTCGCAAGgt ccgttttttc tctctaactc 
4200
tccctctctc tctttctctc tctatatata tcttatatta aattgtagat 
4250
gtgttttatg cgtatataca acaatacaaa cattatctac ataattactg 
4300
taagatgtac gttttattct aaagagataa tattttgatt aattgaatag 
4350
gcagttgtcc ctctatgacc gtccatatta gctctctttt aagtacggtg 
4400
tctaattgac aaataaatga ttcacgtagc tagggttttt acggtttatt 
4450
tatatatatt gaatataacc acattcatgt aaaagattaa tgaaagtaat 
4500
tatcttgggg ttttttttgg gatctaaaca gTTACCAGTG CCTCACCTTA 
4550
TAGATCAAGC GACATCATAC ATGATCCAAT TGAAAGAGAA TGTAAATTAT 
4600
TTGAAAGAGA AGAAAAGGAC ATTGTTACAA GGAGAACTCG GGAATCTCTA 
4650
CGAAGGGTCG TTTCTTCTAC CCAAACTCAG TATTCGTTCG CGGGATTCGA 
4700
CCATAGAAAT GAATCTGATC ATGGATCTAA ACATGAAAAG AGTAATGTTA 
4750
CACGAGCTTG TGAGTATTTT TGAAGAAGAA GGAGCTCAAG TAATGAGTGC 
4800
TAATCTTCAG AACTTGAATG ATAGGACCAC TTACACAATC ATAGCCCAGg 
4850
taccacatcc acacgcatat gtttgtataa tacacacgta tatgcatgtg 
4900
tcatgtcttt cgtataaatt tttattacat atatttgcag GCTATCATTA 
4950
GTCGGATTGG CATTGATCCA TCAAGGATAG AAGAGAGAGT ACGGAAAATC 
5000
ATCTATGGAT ATATATATTT TGAAGCATGA aatcccaaat gataagtcta 
5050
cgctaacgct agtgtgtttt ttcacacatg tgttagttct ttaaatatga 
5100
gatgagtaat tgcttttgag ttcgattatg ataaatatgt tgaccgtcaa 
5150
cataagaaac cttaaaacgt tgtcgtttcg tttttattca tcccggttta 
5200
attcagtttg gcttggcgtg attttagatt ggtccagatt tgcataattt 
5250
taaccaccga gtaagacagt gggatgtaaa tgtcaataaa atacactatt 
5300
ggggtaaatg tgaaaagaaa aaaatagtaa gaggctatat ttgaaaatct 
5350
aaatatcgca caaattgcaa cccttatttt agatttagga attttgaaac 
5400
ccttgtcgaa gagaaaagag gcaaaatctc agtataaagt ttctcaaaca 
5450
cttgtggtaa gagagcaaaa tcgtgagagA TGGATCTGAT TCAATCCTAC 
5500
GAAGAAGAAG ACGAAGCCGT TGCTTCCTCG CCGGAATCTT CACCGCCTCG 
5550
TATGTTAAAG GCGAAATCAT CGGCGCCGGA GGTAGACGAT ACGGCACTAG 
5600
CTCTCACGGT GGCTAACGTG AATCAATCGA AATCGAAGCC GATTGACCCG 
5650
ACTCAACACG TCGTCTTTTA TAACCCTACC CATGATCAGC TGTGGGCTCC 
5700
GATGTTCGGC CCCGCGCATC CGTATGCGAA AGACGGGATC GCTCAAGGGA 
5750
TGCGGAATCA TAAGCTAGGT TCTGTGGAAG ATGCTTCGAT TGGATCGTTT 
5800
GGGTTTGAAG AGCAGTACCA TACGTTTCAT AAGTGCGGTT ACGCGGCGGA 
5850
TCCGTCTGGG ATGAACTACG TCGGCGATGT TGAGGCGTTT AAGAAGAACG 
5900
ATGGTCTTTC GGTTTTTAAT ATTCCTCAGA GTGAGCAGAA GCGGAGGAAG 
5950
ATTGAGAGGA GCAAAGAGGA GAGGGAAGGG GAAGAGAAAA AGGAAGAGAT 
6000
TGAGCCGGAA GCTGAGAATC CGGAGACGGA AGCTTGGCTT AGGAAGAATA 
6050
GGAAGAGTCC GTGGTCGAGG AAGAAGGAGG TGGTTCAGGG AGAGTTGACG 
6100
GAGGAGCAGA AGAAGTATGC GGAGGATCAT GCCAAGAAGA AGGAGGAGAA 
6150
GGGACAACAA GGTGAAACCA AAGGAGAGCA TTATGCGGAT AAGAGTACCT 
6200
TCCATGGCAA AGAGGAGAAA GATTATCAAG GAAGGTCTTG GATTGAGGCT 
6250
CCTAAAGATG CTAAGGCGAA CAATGATCAT TGCTACATTC CAAAACGTTT 
6300
GGTTCATACA TGGAGTGGGC ACACGAAAGG TGTTTCCGCT ATTAGGTTCT 
6350
TCCCAAAGCA AGGACATTTG CTTCTCTCTG CAGGTATGGA TTGTAAGGTT 
6400
AAGATTTGGG ATGTGTATAA CTCTGGTAAA TGTATGAGGA CTTACATGGG 
6450
TCACGCCAAA GCTGTGAGGG ATATTTGCTT CTCCAATGAT GGGTCTAAAT 
6500
TCTTGACTGC TGGGTATGAT AAGAACATTA AGTATTGGGA CACGGAAACT 
6550
GGCCAAGTTA TATCGACTTT CTCCACTGGG AAGATTCCGT ATGTGGTTAA 
6600
GCTGAATCCG GATGATGACA AGCAGAACAT TTTGTTGGCT GGTATGAGTG 
6650
ATAAGAAGAT TGTGCAGTGG GATATTAATA CGGGGGAGGT TACGCAAGAG 
6700
TATG
6750