Locus |
Common name |
Short description |
AT1G12540 |
bHLH055 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT1G12540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
247 |
StyI
| C|C[AT][AT]GG |
483 |
XbaI
| T|CTAGA |
171 |
Click here to view TAIR data
>AT1G12540.1 length:597
ATGACATTAA GCGAAATCAT GAAAGGAGAC GATGAGCCGA AGAACAAGAG | 50 |
AGCTAAACAT AAAGAGCTTG AGAGACAAAG AAGGCAAGAA AACACATCTC | 100 |
TATTCAAGAT TCTAAGATAT TTATTGCCAT CTCAATACAT AAAGGGTAAA | 150 |
CGTTCCTCGG CAGATCACGT TCTAGAAGCA GTGAATTACA TCAAAGACTT | 200 |
ACAGAAGAAG ATCAAAGAGG TCAGCGAAAA AAGAGATAGA ATCAAGAGAT | 250 |
CTATTACTCA TCCATCATCA AGAGGAGAAT TTTCAATAAG ATCATTAGCA | 300 |
TCATCAACTT GTTCTTGTGT TGGAGACACG AACATTGCTG TTGTGGTTAG | 350 |
GCCTTGTTTG ATCGGACTAG AGATCGTAGT AAGTTGTTGT AACAGACACG | 400 |
AATCTTGTCT ATCAAGTGTT CTTCAACTCC TGGCTCAAGA GCAATGCTTT | 450 |
AATATTGTTA GTTGCATCTC AACTAGACTA CACCAAGGAT TCATACACAC | 500 |
CATTGCTTCT GAGGTCGAGG AGGGAATAGA GGTTTATTTC TCAGAGCTTC | 550 |
AAGAAAAGAT AATCAAAATT GGAACCTCAA GAGTCACTAC TCGCTAG | 600 |
>AT1G12540.1 longest ORF length:198
MTLSEIMKGD DEPKNKRAKH KELERQRRQE NTSLFKILRY LLPSQYIKGK | 50 |
RSSADHVLEA VNYIKDLQKK IKEVSEKRDR IKRSITHPSS RGEFSIRSLA | 100 |
SSTCSCVGDT NIAVVVRPCL IGLEIVVSCC NRHESCLSSV LQLLAQEQCF | 150 |
NIVSCISTRL HQGFIHTIAS EVEEGIEVYF SELQEKIIKI GTSRVTTR | 200 |
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