Locus |
Common name |
Short description |
AT1G12610 |
DDF1, DREB1F, FTL1 |
DWARF AND DELAYED FLOWERING 1, Integrase-type DNA-binding superfamily protein (.1) |
>AT1G12610.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtsI, ClaI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StyI, SwaI, Taqƒ¿I, TliI, TspRI, Tth111I, XbaI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
195, 508, 534 |
AccIII(BspMII)
| T|CCGGA |
297 |
AciI
| C|CGC |
154, 237, 261, 530 |
AflIII
| A|CPuPyGT |
73 |
AluI
| AG|CT |
220, 325 |
ApaLI
| G|TGCAC |
200 |
ApoI
| Pu|AATTPy |
249, 450 |
AvaI
| C|PyCGPuG |
166 |
BanI
| G|GPyPuCC |
279 |
BsaWI
| [AT]|CCGG[AT] |
276, 297 |
BsiEI
| CGPuPy|CG |
538 |
BsiHKAI
| G[AT]GC[AT]|C |
200 |
BslI
| CCNNNNN|NNGG |
268, 384 |
BsoBI
| C|PyCGPuG |
166 |
Bsp1286I
| G[GAT]GC[CAT]|C |
200 |
BspEI
| T|CCGGA |
297 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
279 |
BsrFI
| Pu|CCGGPy |
345 |
BstAPI
| GCANNNN|NTGC |
198 |
BstF5I
| GGATGNN| |
301 |
BstUI
| CG|CG |
195, 508, 534 |
BstYI
| Pu|GATCPy |
235 |
BtrI
| CAC|GTC |
74 |
Cac8I
| GCN|NGC |
45, 198 |
Cfr10I
| [AG]|CCGG[TC] |
345 |
DdeI
| C|TNAG |
37 |
DpnI
| GA-CH3|TC |
234, 293, 435, 537 |
DpnII
| |GATC |
234, 293, 435, 537 |
DraIII
| CACNNN|GTG |
208 |
DrdI
| GACNNNN|NNGTC |
121 |
EcoRI
| G|AATTC |
450 |
Fnu4HI
| GC|NGC |
154, 192, 269, 318, 327, 530 |
HaeIII
| GG|CC |
33, 342, 516 |
HhaI
| GCG|C |
194 |
HinP1I
| G|CGC |
194 |
HinfI
| G|ANTC |
258, 285, 505, 557 |
HpaII
| C|CGG |
275, 281, 296, 344, 420 |
Hpy188I
| TCN|GA |
133, 438 |
Hpy99I
| CG[AT]CG| |
142, 206, 493 |
HpyCH4III
| ACN|GT |
109, 369 |
HpyCH4IV
| A|CGT |
73, 207 |
HpyCH4V
| TG|CA |
199 |
MboI
| |GATC |
234, 293, 435, 537 |
MseI
| T|TAA |
63, 625 |
MspI
| C|CGG |
275, 281, 296, 344, 420 |
MwoI
| GCNNNNN|NNGC |
41, 189, 219, 261, 278, 324 |
NlaIII
| CATG| |
240, 553 |
NlaIV
| GGN|NCC |
279, 418, 516 |
NspI
| PuCATG|Py |
241 |
PvuI
| CGAT|CG |
538 |
Sau3AI
| |GATC |
234, 293, 435, 537 |
Sau96I
| G|GNCC |
516 |
StuI
| AGG|CCT |
34 |
TfiI
| G|A[AT]TC |
285 |
TseI
| G|C[AT]GC |
192, 327 |
Tsp45I
| |GT[CG]AC |
76, 112 |
Tsp509I
| |AATT |
248, 364, 449 |
XcmI
| CCANNNNN|NNNNTGG |
188 |
Click here to view TAIR data
>AT1G12610.1 length:630
ATGAATAATG ATGATATTAT TCTGGCGGAG ATGAGGCCTA AGAAGCGTGC | 50 |
GGGAAGGAGA GTGTTTAAGG AGACACGTCA CCCAGTTTAC AGAGGCATAA | 100 |
GGCGGAGGAA CGGTGACAAA TGGGTCTGCG AAGTCAGAGA ACCGACGCAC | 150 |
CAACGCCGCA TTTGGCTCGG GACTTATCCC ACAGCAGATA TGGCAGCGCG | 200 |
TGCACACGAC GTGGCGGTTT TAGCTCTGCG TGGGAGATCC GCATGTTTGA | 250 |
ATTTCGCCGA CTCCGCTTGG CGGCTTCCGG TGCCGGAATC CAATGATCCG | 300 |
GATGTGATAA GAAGAGTTGC GGCGGAAGCT GCGGAGATGT TTAGGCCGGT | 350 |
GGATTTAGAA AGTGGAATTA CGGTTTTGCC TTGTGCGGGA GATGATGTGG | 400 |
ATTTGGGTTT TGGTTCGGGT TCCGGCTCTG GTTCGGGATC GGAGGAGAGG | 450 |
AATTCTTCTT CGTATGGATT TGGAGACTAC GAAGAAGTCT CAACGACGAT | 500 |
GATGAGACTC GCGGAGGGGC CACTAATGTC GCCGCCGCGA TCGTATATGG | 550 |
AAGACATGAC TCCTACTAAT GTTTACACGG AAGAAGAGAT GTGTTATGAA | 600 |
GATATGTCAT TGTGGAGTTA CAGATATTAA | 650 |
>AT1G12610.1 longest ORF length:209
MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH | 50 |
QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP | 100 |
DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER | 150 |
NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE | 200 |
DMSLWSYRY | 250 |
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