fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G12610 (DDF1, DREB1F, FTL1)

Alias DDF1, DREB1F, FTL1
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFAP2/EREBP / CBF1
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description DWARF AND DELAYED FLOWERING 1, Integrase-type DNA-binding superfamily protein (.1)
TAIR annotation Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. (.1)
Gene model
Gene model cDNA support
AT1G12610.1 10
Entry clone (w/o stop) RE_0019_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10371: other metabolic processes ->regulation of gibberellin biosynthetic process
(P) 19760: other cellular processes ->glucosinolate metabolic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 48510: other biological processes ->regulation of timing of transition from vegetative to reproductive phase
(P) 50826: response to stress ->response to freezing
(P) 51510: cell organization and biogenesis ->regulation of unidimensional cell growth
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9408: response to stress ->response to heat
(P) 9414: response to stress ->response to water deprivation
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 3 4
soybean 1 3 4 8
rice
sorghum
physcomitrella
Total 1 4 7 12
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        

         aerial rosette (A20182, A20184), 
         abnormal shaped leaf (A20184), 
         pale green leaf (A20182, A20184), 
         bushy (A20182, A20184)


 and more...        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         indehiscent silique 
         (A20337-160)
         

         indehiscent silique 
         (A20337-185)
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID556
           Torenia
           35S:AtCDS-SRDX
           2007-07-06
           flower bulk, 12 lines 
           paled color 
[Publication link]		
           
          

         

         

          Comment