Locus |
Common name |
Short description |
AT1G19210 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G19210.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
141, 154, 240 |
AluI
| AG|CT |
259, 477, 504 |
ApoI
| Pu|AATTPy |
549 |
BanII
| GPuGCPy|C |
114 |
BsaBI
| GATNN|NNATC |
500 |
BsaJI
| C|CNNGG |
174, 426 |
BsaWI
| [AT]|CCGG[AT] |
213, 457 |
BslI
| CCNNNNN|NNGG |
387 |
Bsp1286I
| G[GAT]GC[CAT]|C |
114 |
BspDI
| AT|CGAT |
345 |
BssKI
| |CCNGG |
426 |
BstF5I
| GGATGNN| |
292 |
BstNI
| CC|[AT]GG |
426 |
BstUI
| CG|CG |
141, 154, 240 |
BtgI
| C|CPuPyGG |
174 |
Cac8I
| GCN|NGC |
144 |
ClaI
| AT|CGAT |
345 |
DdeI
| C|TNAG |
130, 247 |
DpnI
| GA-CH3|TC |
76, 217, 243, 461 |
DpnII
| |GATC |
76, 217, 243, 461 |
Fnu4HI
| GC|NGC |
138, 156, 261, 476 |
HhaI
| GCG|C |
140 |
HinP1I
| G|CGC |
140 |
HinfI
| G|ANTC |
294, 330, 357 |
HpaII
| C|CGG |
212, 222, 456 |
Hpy188I
| TCN|GA |
72, 79, 246, 360, 380, 408, 444, 469 |
Hpy99I
| CG[AT]CG| |
152, 382 |
HpyCH4III
| ACN|GT |
384 |
HpyCH4IV
| A|CGT |
100, 229, 351 |
HpyCH4V
| TG|CA |
21 |
MboI
| |GATC |
76, 217, 243, 461 |
MspI
| C|CGG |
212, 222, 456 |
MwoI
| GCNNNNN|NNGC |
144, 273, 482 |
NlaIII
| CATG| |
535 |
NlaIV
| GGN|NCC |
532 |
NruI
| TCG|CGA |
241 |
PspGI
| |CC[AT]GG |
426 |
RsaI
| GT|AC |
31 |
Sau3AI
| |GATC |
76, 217, 243, 461 |
ScrFI
| CC|NGG |
426 |
Taqƒ¿I
| T|CGA |
17, 150, 344 |
TfiI
| G|A[AT]TC |
294, 330, 357 |
TseI
| G|C[AT]GC |
261, 476 |
Tsp509I
| |AATT |
194, 278, 548 |
Click here to view TAIR data
>AT1G19210.1 length:558
ATGGAAGGGT CGTCTTCTTC GATGCAGTCA AAGTACAAAG GAGTGAGGAA | 50 |
GAGGAAATGG GGAAAATGGG TTTCAGAGAT CAGACTTCCC AACAGCAGAG | 100 |
AACGTATTTG GTTGGGCTCT TACGATACTC CTGAGAAGGC GGCGCGTGCT | 150 |
TTCGACGCGG CTCTTTATTG TCTCCGTGGC AACAACGCAA AGTTCAATTT | 200 |
CCCTGATAAT CCTCCGGTGA TCTCCGGCGG ACGTAACTTG TCGCGATCTG | 250 |
AGATAAGAGA AGCTGCTGCG AGGTTCGCTA ATTCGGCGGA GGATGATTCA | 300 |
AGTGGCGGAG CAGGATACGA GATACGGCAA GAATCTGCTT CAACATCGAT | 350 |
GGACGTTGAT TCGGAGTTTT TGAGTATGCT TCCGACGGTT GGTTCGGGTA | 400 |
ACTTCGCTTC GGAGTTTGGG TTATTCCCTG GGTTTGATGA TTTCTCCGAT | 450 |
GAATACTCCG GTGATCGTTT CAGAGAGCAG CTTTCGCCTA CACAAGATTA | 500 |
TTATCAGCTT GGAGAAGAGA CTTACGCCGA TGGTTCCATG TTTCTTTGGA | 550 |
ATTTTTGA | 600 |
>AT1G19210.1 longest ORF length:185
MEGSSSSMQS KYKGVRKRKW GKWVSEIRLP NSRERIWLGS YDTPEKAARA | 50 |
FDAALYCLRG NNAKFNFPDN PPVISGGRNL SRSEIREAAA RFANSAEDDS | 100 |
SGGAGYEIRQ ESASTSMDVD SEFLSMLPTV GSGNFASEFG LFPGFDDFSD | 150 |
EYSGDRFREQ LSPTQDYYQL GEETYADGSM FLWNF | 200 |
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