Locus |
Common name |
Short description |
AT1G23380 |
KNAT6S, KNAT6L, KNAT6 |
KNOTTED1-like homeobox gene 6 (.1.2) |
>AT1G23380.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
148 |
HindIII
| A|AGCTT |
98, 299, 721 |
Click here to view TAIR data
>AT1G23380.1 length:984
ATGGATGGAA TGTACAATTT CCATTCGGCC GGTGATTATT CAGATAAGTC | 50 |
GGTTCTGATG ATGTCACCGG AGAGTCTCAT GTTTCCTTCC GATTACCAAG | 100 |
CTTTGCTATG TTCCTCCGCC GGTGAAAATC GTGTCTCTGA TGTTTTCGGA | 150 |
TCCGACGAGC TACTCTCAGT AGCCGTCTCC GCTTTGTCGT CGGAGGCGGC | 200 |
TTCGATCGCT CCGGAGATCC GAAGAAATGA TGATAACGTT TCTCTAACTG | 250 |
TCATCAAAGC TAAAATCGCT TGTCATCCTT CGTATCCTCG CTTACTTCAA | 300 |
GCTTACATCG ATTGCCAAAA GGTCGGAGCA CCACCGGAGA TAGCGTGTTT | 350 |
ACTAGAGGAG ATTCAACGGG AGAGTGATGT TTATAAGCAA GAGGTTGTTC | 400 |
CTTCTTCTTG CTTTGGAGCT GATCCTGAGC TTGATGAATT TATGGAAACG | 450 |
TACTGCGATA TATTAGTGAA ATACAAATCG GATCTAGCAA GACCGTTTGA | 500 |
CGAGGCAACG TGTTTCTTGA ACAAGATTGA GATGCAGCTA CGGAACCTAT | 550 |
GTACTGGTGT CGAGTCTGCC AGGGGAGTTT CTGAGGATGG TGTAATATCA | 600 |
TCTGACGAGG AACTGAGTGG AGGTGATCAT GAGGTAGCAG AGGATGGGAG | 650 |
ACAAAGATGT GAAGACCGGG ACCTCAAAGA TAGGTTGCTA CGCAAATTTG | 700 |
GAAGCCGTAT TAGTACTTTA AAGCTTGAGT TCTCAAAGAA GAAGAAGAAA | 750 |
GGAAAGTTAC CAAGAGAAGC AAGACAAGCT CTTCTTGATT GGTGGAATCT | 800 |
CCATTATAAG TGGCCTTACC CTACTGAAGG AGATAAGATA GCATTAGCTG | 850 |
ATGCAACGGG GTTAGACCAA AAACAAATCA ACAATTGGTT TATAAACCAA | 900 |
AGGAAACGTC ATTGGAAGCC ATCAGAGAAT ATGCCTTTCG CTATGATGGA | 950 |
TGATTCTAGT GGATCATTCT TTACCGAGGA ATGA | 1000 |
>AT1G23380.1 longest ORF length:327
MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG | 50 |
SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ | 100 |
AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET | 150 |
YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS | 200 |
SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK | 250 |
GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ | 300 |
RKRHWKPSEN MPFAMMDDSS GSFFTEE | 350 |
|