fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G23380 KNAT6S, KNAT6L, KNAT6 KNOTTED1-like homeobox gene 6 (.1.2)

>AT1G23380.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 148
HindIII A|AGCTT 98, 299, 721


Click here to view TAIR data

>AT1G23380.1 length:984
ATGGATGGAA TGTACAATTT CCATTCGGCC GGTGATTATT CAGATAAGTC 
50
GGTTCTGATG ATGTCACCGG AGAGTCTCAT GTTTCCTTCC GATTACCAAG 
100
CTTTGCTATG TTCCTCCGCC GGTGAAAATC GTGTCTCTGA TGTTTTCGGA 
150
TCCGACGAGC TACTCTCAGT AGCCGTCTCC GCTTTGTCGT CGGAGGCGGC 
200
TTCGATCGCT CCGGAGATCC GAAGAAATGA TGATAACGTT TCTCTAACTG 
250
TCATCAAAGC TAAAATCGCT TGTCATCCTT CGTATCCTCG CTTACTTCAA 
300
GCTTACATCG ATTGCCAAAA GGTCGGAGCA CCACCGGAGA TAGCGTGTTT 
350
ACTAGAGGAG ATTCAACGGG AGAGTGATGT TTATAAGCAA GAGGTTGTTC 
400
CTTCTTCTTG CTTTGGAGCT GATCCTGAGC TTGATGAATT TATGGAAACG 
450
TACTGCGATA TATTAGTGAA ATACAAATCG GATCTAGCAA GACCGTTTGA 
500
CGAGGCAACG TGTTTCTTGA ACAAGATTGA GATGCAGCTA CGGAACCTAT 
550
GTACTGGTGT CGAGTCTGCC AGGGGAGTTT CTGAGGATGG TGTAATATCA 
600
TCTGACGAGG AACTGAGTGG AGGTGATCAT GAGGTAGCAG AGGATGGGAG 
650
ACAAAGATGT GAAGACCGGG ACCTCAAAGA TAGGTTGCTA CGCAAATTTG 
700
GAAGCCGTAT TAGTACTTTA AAGCTTGAGT TCTCAAAGAA GAAGAAGAAA 
750
GGAAAGTTAC CAAGAGAAGC AAGACAAGCT CTTCTTGATT GGTGGAATCT 
800
CCATTATAAG TGGCCTTACC CTACTGAAGG AGATAAGATA GCATTAGCTG 
850
ATGCAACGGG GTTAGACCAA AAACAAATCA ACAATTGGTT TATAAACCAA 
900
AGGAAACGTC ATTGGAAGCC ATCAGAGAAT ATGCCTTTCG CTATGATGGA 
950
TGATTCTAGT GGATCATTCT TTACCGAGGA ATGA
1000

>AT1G23380.1 longest ORF length:327
MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG 
50
SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ 
100
AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET 
150
YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS 
200
SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK 
250
GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ 
300
RKRHWKPSEN MPFAMMDDSS GSFFTEE
350