fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G23380 KNAT6S, KNAT6L, KNAT6 KNOTTED1-like homeobox gene 6 (.1.2)

>AT1G23380.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 148
HindIII A|AGCTT 98, 299, 727


Click here to view TAIR data

>AT1G23380.2 length:990
ATGGATGGAA TGTACAATTT CCATTCGGCC GGTGATTATT CAGATAAGTC 
50
GGTTCTGATG ATGTCACCGG AGAGTCTCAT GTTTCCTTCC GATTACCAAG 
100
CTTTGCTATG TTCCTCCGCC GGTGAAAATC GTGTCTCTGA TGTTTTCGGA 
150
TCCGACGAGC TACTCTCAGT AGCCGTCTCC GCTTTGTCGT CGGAGGCGGC 
200
TTCGATCGCT CCGGAGATCC GAAGAAATGA TGATAACGTT TCTCTAACTG 
250
TCATCAAAGC TAAAATCGCT TGTCATCCTT CGTATCCTCG CTTACTTCAA 
300
GCTTACATCG ATTGCCAAAA GAAACAGGTC GGAGCACCAC CGGAGATAGC 
350
GTGTTTACTA GAGGAGATTC AACGGGAGAG TGATGTTTAT AAGCAAGAGG 
400
TTGTTCCTTC TTCTTGCTTT GGAGCTGATC CTGAGCTTGA TGAATTTATG 
450
GAAACGTACT GCGATATATT AGTGAAATAC AAATCGGATC TAGCAAGACC 
500
GTTTGACGAG GCAACGTGTT TCTTGAACAA GATTGAGATG CAGCTACGGA 
550
ACCTATGTAC TGGTGTCGAG TCTGCCAGGG GAGTTTCTGA GGATGGTGTA 
600
ATATCATCTG ACGAGGAACT GAGTGGAGGT GATCATGAGG TAGCAGAGGA 
650
TGGGAGACAA AGATGTGAAG ACCGGGACCT CAAAGATAGG TTGCTACGCA 
700
AATTTGGAAG CCGTATTAGT ACTTTAAAGC TTGAGTTCTC AAAGAAGAAG 
750
AAGAAAGGAA AGTTACCAAG AGAAGCAAGA CAAGCTCTTC TTGATTGGTG 
800
GAATCTCCAT TATAAGTGGC CTTACCCTAC TGAAGGAGAT AAGATAGCAT 
850
TAGCTGATGC AACGGGGTTA GACCAAAAAC AAATCAACAA TTGGTTTATA 
900
AACCAAAGGA AACGTCATTG GAAGCCATCA GAGAATATGC CTTTCGCTAT 
950
GATGGATGAT TCTAGTGGAT CATTCTTTAC CGAGGAATGA 
1000

>AT1G23380.2 longest ORF length:329
MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG 
50
SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ 
100
AYIDCQKKQV GAPPEIACLL EEIQRESDVY KQEVVPSSCF GADPELDEFM 
150
ETYCDILVKY KSDLARPFDE ATCFLNKIEM QLRNLCTGVE SARGVSEDGV 
200
ISSDEELSGG DHEVAEDGRQ RCEDRDLKDR LLRKFGSRIS TLKLEFSKKK 
250
KKGKLPREAR QALLDWWNLH YKWPYPTEGD KIALADATGL DQKQINNWFI 
300
NQRKRHWKPS ENMPFAMMDD SSGSFFTEE
350