Locus |
Common name |
Short description |
AT1G26310 |
CAL1, AGL10, CAL |
CAULIFLOWER, AGAMOUS-like 10, K-box region and MADS-box transcription factor family protein (.1) |
>AT1G26310.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HpaII, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspI, MwoI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
583 |
AciI
| C|CGC |
574, 759 |
AflII
| C|TTAAG |
298, 412 |
AluI
| AG|CT |
91, 234, 312, 396, 567 |
BfaI
| C|TAG |
197 |
BglII
| A|GATCT |
101 |
BsaJI
| C|CNNGG |
122, 747 |
BslI
| CCNNNNN|NNGG |
386, 473, 662 |
BspHI
| T|CATGA |
443 |
BsrI
| ACTGGN| |
76, 275 |
BstYI
| Pu|GATCPy |
101, 375, 717 |
Bsu36I
| CC|TNAGG |
541 |
Cac8I
| GCN|NGC |
293, 503 |
DdeI
| C|TNAG |
94, 540 |
DpnI
| GA-CH3|TC |
40, 100, 374, 631, 716 |
DpnII
| |GATC |
40, 100, 374, 631, 716 |
DrdI
| GACNNNN|NNGTC |
276 |
Fnu4HI
| GC|NGC |
392, 566, 577, 759 |
HaeIII
| GG|CC |
301 |
HincII
| GTPy|PuAC |
583 |
HinfI
| G|ANTC |
177, 249, 450, 722 |
Hpy188I
| TCN|GA |
174, 641, 719 |
Hpy99I
| CG[AT]CG| |
581 |
HpyCH4IV
| A|CGT |
255 |
HpyCH4V
| TG|CA |
182, 241, 262 |
MboI
| |GATC |
40, 100, 374, 631, 716 |
MseI
| T|TAA |
258, 297, 411 |
MslI
| CAPyNN|NNPuTG |
260 |
MspA1I
| C[AC]G|C[GT]G |
235, 568 |
N.BstNBI
| GAGTCNNNN|N |
455 |
NlaIII
| CATG| |
184, 442, 502, 628 |
NlaIV
| GGN|NCC |
357 |
NspI
| PuCATG|Py |
503 |
PflMI
| CCANNNN|NTGG |
386 |
PvuII
| CAG|CTG |
235, 568 |
RsaI
| GT|AC |
166, 194, 590, 673 |
SalI
| G|TCGAC |
583 |
Sau3AI
| |GATC |
40, 100, 374, 631, 716 |
ScaI
| AGT|ACT |
167 |
SmlI
| C|TPyPuAG |
298, 370, 400, 412 |
SphI
| GCATG|C |
503 |
StyI
| C|C[AT][AT]GG |
747 |
Taqƒ¿I
| T|CGA |
62, 162, 582 |
TfiI
| G|A[AT]TC |
177 |
TseI
| G|C[AT]GC |
392, 566, 577 |
Tsp45I
| |GT[CG]AC |
54 |
Tsp509I
| |AATT |
18, 156, 740 |
Click here to view TAIR data
>AT1G26310.1 length:768
ATGGGAAGGG GTAGGGTTGA ATTGAAGAGG ATAGAGAACA AGATCAATAG | 50 |
ACAAGTGACA TTCTCGAAAA GAAGAACTGG TCTTTTGAAG AAAGCTCAGG | 100 |
AGATCTCTGT TCTTTGTGAT GCCGAGGTTT CCCTTATTGT CTTCTCCCAT | 150 |
AAGGGCAAAT TGTTCGAGTA CTCCTCTGAA TCTTGCATGG AGAAGGTACT | 200 |
AGAACGCTAC GAGAGGTATT CTTACGCCGA GAGACAGCTG ATTGCACCTG | 250 |
ACTCTCACGT TAATGCACAG ACGAACTGGT CAATGGAGTA TAGCAGGCTT | 300 |
AAGGCCAAGA TTGAGCTTTT GGAGAGAAAC CAAAGGCATT ATCTGGGAGA | 350 |
AGAGTTGGAA CCAATGAGCC TCAAGGATCT CCAAAATCTG GAGCAGCAGC | 400 |
TTGAGACTGC TCTTAAGCAC ATTCGCTCCA GAAAAAATCA ACTCATGAAT | 450 |
GAGTCCCTCA ACCACCTCCA AAGAAAGGAG AAGGAGATAC AGGAGGAAAA | 500 |
CAGCATGCTT ACCAAACAGA TAAAGGAGAG GGAAAACATC CTAAGGACAA | 550 |
AACAAACCCA ATGTGAGCAG CTGAACCGCA GCGTCGACGA TGTACCACAG | 600 |
CCACAACCAT TTCAACACCC CCATCTTTAC ATGATCGCTC ATCAGACTTC | 650 |
TCCTTTCCTA AATATGGGTG GTTTGTACCA AGAAGAAGAC CAAACGGCGA | 700 |
TGAGGAGGAA CAATCTGGAT CTGACTCTTG AACCCATTTA CAATTACCTT | 750 |
GGCTGTTACG CCGCTTGA | 800 |
>AT1G26310.1 longest ORF length:255
MGRGRVELKR IENKINRQVT FSKRRTGLLK KAQEISVLCD AEVSLIVFSH | 50 |
KGKLFEYSSE SCMEKVLERY ERYSYAERQL IAPDSHVNAQ TNWSMEYSRL | 100 |
KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN | 150 |
ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ | 200 |
PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL | 250 |
GCYAA | 300 |
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