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| Locus | Common name | Short description |
| AT1G30490 | ATHB9, PHV | PHAVOLUTA, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1) |
>AT1G30490.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AciI, AfeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BstBI, BstEII, BstUI, BstZ17I, BtrI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PleI, PmeI, PpuMI, PsiI, PspOMI, PvuI, RsrII, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SphI, SspI, SwaI, TliI, XhoI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 559 |
| AccIII(BspMII) | T|CCGGA | 594 |
| AclI | AA|CGTT | 1993 |
| AflII | C|TTAAG | 2173 |
| AflIII | A|CPuPyGT | 1122 |
| AgeI | A|CCGGT | 1537, 2235, 2427 |
| AluI | AG|CT | 91, 128, 147, 247, 273, 291, 404, 490, 613, 780, 823, 872, 938, 1346, 1390, 1453, 1677, 1722, 2071, 2137, 2257, 2341 |
| AlwNI | CAGNNN|CTG | 551 |
| ApoI | Pu|AATTPy | 1324 |
| AvaI | C|PyCGPuG | 1548, 1658 |
| AvaII | G|G[AT]CC | 566, 591, 924, 2186 |
| BanII | GPuGCPy|C | 2342 |
| BbvCI | CC|TCAGC | 470 |
| BclI | T|GATCA | 1020, 1824 |
| BfaI | C|TAG | 126, 860, 1146, 1853, 1865, 1902, 2021 |
| BglII | A|GATCT | 2127 |
| BlpI | GC|TNAGC | 1721 |
| BsaAI | PyAC|GTPu | 647 |
| BsaHI | GPu|CGPyC | 1175 |
| BsaJI | C|CNNGG | 17, 521, 1218, 1658 |
| BsaWI | [AT]|CCGG[AT] | 594, 1537, 2235, 2427 |
| BsiHKAI | G[AT]GC[AT]|C | 1718, 2342 |
| BslI | CCNNNNN|NNGG | 42, 539, 990, 1365, 2040, 2489 |
| BsoBI | C|PyCGPuG | 1548, 1658 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1718, 2342 |
| BspDI | AT|CGAT | 1741 |
| BspEI | T|CCGGA | 594 |
| BspHI | T|CATGA | 359, 1301 |
| BsrFI | Pu|CCGGPy | 1537, 2235, 2427 |
| BsrI | ACTGGN| | 563, 760, 910 |
| BssKI | |CCNGG | 588, 1217, 1657, 2040 |
| BssSI | C|TCGTG | 661, 827 |
| BstAPI | GCANNNN|NTGC | 648 |
| BstF5I | GGATGNN| | 582, 1036, 1259 |
| BstNI | CC|[AT]GG | 588, 2040 |
| BstXI | CCANNNNN|NTGG | 576, 1167 |
| BstYI | Pu|GATCPy | 1851, 2127 |
| Bsu36I | CC|TNAGG | 1060 |
| BtgI | C|CPuPyGG | 17 |
| BtsI | GCAGTGNN| | 634 |
| Cac8I | GCN|NGC | 1178, 1330, 2442 |
| Cfr10I | [AG]|CCGG[TC] | 1537, 2235, 2427 |
| ClaI | AT|CGAT | 1741 |
| DdeI | C|TNAG | 112, 135, 276, 469, 793, 843, 1059, 1116, 1440, 1500, 1720, 2146 |
| DpnI | GA-CH3|TC | 193, 311, 701, 891, 1019, 1297, 1823, 1850, 2092, 2126, 2365 |
| DpnII | |GATC | 193, 311, 701, 891, 1019, 1297, 1823, 1850, 2092, 2126, 2365 |
| DrdI | GACNNNN|NNGTC | 1036, 1474, 1622 |
| EcoNI | CCTNN|NNNAGG | 42, 539 |
| Fnu4HI | GC|NGC | 443, 642, 819, 1110, 1491, 1676, 1687, 2209, 2372 |
| HaeIII | GG|CC | 656, 914, 1062 |
| HhaI | GCG|C | 1126 |
| HinP1I | G|CGC | 1126 |
| HincII | GTPy|PuAC | 481, 559, 787 |
| HindIII | A|AGCTT | 292, 939, 1391 |
| HinfI | G|ANTC | 30, 51, 212, 243, 355, 370, 411, 597, 740, 1074, 1210, 1430, 1746, 1887, 2006, 2142, 2328, 2387, 2475 |
| HpaI | GTT|AAC | 481 |
| HpaII | C|CGG | 54, 77, 593, 1216, 1536, 1657, 2234, 2393, 2426 |
| Hpy188I | TCN|GA | 134, 257, 743, 794, 1115, 1501, 1531, 1817, 1890, 2009, 2352 |
| Hpy99I | CG[AT]CG| | 2446 |
| HpyCH4III | ACN|GT | 261, 724, 1104, 1342, 1979, 2107, 2448 |
| HpyCH4IV | A|CGT | 63, 436, 646, 1934, 1992 |
| HpyCH4V | TG|CA | 318, 536, 629, 904, 1183, 1404, 1492, 1674, 1762, 1834, 2049, 2122, 2248, 2370 |
| MboI | |GATC | 193, 311, 701, 891, 1019, 1297, 1823, 1850, 2092, 2126, 2365 |
| MseI | T|TAA | 480, 1190, 1305, 1913, 2172 |
| MslI | CAPyNN|NNPuTG | 2120, 2195 |
| MspA1I | C[AC]G|C[GT]G | 405 |
| MspI | C|CGG | 54, 77, 593, 1216, 1536, 1657, 2234, 2393, 2426 |
| MwoI | GCNNNNN|NNGC | 440, 470, 648, 1326, 1461, 1488, 1761, 1971, 2256 |
| N.BstNBI | GAGTCNNNN|N | 248, 416, 1079 |
| NciI | CC|[CG]GG | 1217, 1657 |
| NcoI | C|CATGG | 17 |
| NdeI | CA|TATG | 1514 |
| NlaIII | CATG| | 16, 358, 676, 1022, 1121, 1300, 1524, 1589, 1625, 1645, 2269, 2368, 2416 |
| NlaIV | GGN|NCC | 206, 566, 716, 916, 1000, 1333, 1436, 1544, 1873, 2186 |
| NspI | PuCATG|Py | 1122, 2270 |
| PciI | A|CATGT | 1122 |
| PflFI | GACN|NNGTC | 565 |
| PflMI | CCANNNN|NTGG | 1365, 2489 |
| PmlI | CAC|GTG | 647 |
| PshAI | GACNN|NNGTC | 2333 |
| PspGI | |CC[AT]GG | 588, 2040 |
| PstI | CTGCA|G | 630, 1184, 1675 |
| PvuII | CAG|CTG | 405 |
| RsaI | GT|AC | 61, 771, 852 |
| SacI | GAGCT|C | 2342 |
| SalI | G|TCGAC | 559 |
| Sau3AI | |GATC | 193, 311, 701, 891, 1019, 1297, 1823, 1850, 2092, 2126, 2365 |
| Sau96I | G|GNCC | 566, 591, 915, 924, 2186 |
| ScrFI | CC|NGG | 588, 1217, 1657, 2040 |
| SfcI | C|TPuPyAG | 545, 630, 1184, 1675 |
| SmaI | CCC|GGG | 1658 |
| SmlI | C|TPyPuAG | 97, 1041, 1139, 2173 |
| SpeI | A|CTAGT | 1147 |
| StuI | AGG|CCT | 1063 |
| StyI | C|C[AT][AT]GG | 17, 521 |
| Taq��I | T|CGA | 180, 187, 223, 367, 503, 558, 727, 735, 777, 1248, 1476, 1584, 1602, 1740, 1800, 1840, 2003, 2310, 2411 |
| TfiI | G|A[AT]TC | 51, 212, 355, 370, 597, 1430, 1746, 1887, 2006, 2142, 2387, 2475 |
| TseI | G|C[AT]GC | 443, 642, 819, 1110, 1491, 1676, 2209, 2372 |
| Tsp45I | |GT[CG]AC | 721, 829 |
| Tsp509I | |AATT | 1132, 1323 |
| TspRI | NNCA[CG]TGNN| | 264, 379, 634, 760, 2486 |
| Tth111I | GACN|NNGTC | 565 |
| XbaI | T|CTAGA | 861, 1903 |
| XcmI | CCANNNNN|NNNNTGG | 384, 1170 |
| XmaI | C|CCGGG | 1658 |
| XmnI | GAANN|NNTTC | 355, 1598 |
Click here to view TAIR data
>AT1G30490.1 length:2526
ATGATGGCTC ATCACTCCAT GGACGATAGA GACTCTCCTG ATAAAGGATT | 50 |
TGATTCCGGC AAGTACGTTA GATACACGCC GGAACAAGTT GAAGCTCTTG | 100 |
AGAGAGTTTA TGCTGAGTGT CCTAAACCTA GCTCTCTGAG AAGACAACAG | 150 |
CTTATTCGTG AATGTCCCAT TCTCTGTAAC ATCGAGCCTC GACAGATCAA | 200 |
AGTTTGGTTC CAGAATCGCA GATGTCGAGA GAAGCAGAGG AAAGAGTCAG | 250 |
CTCGTCTTCA GACAGTGAAC AGGAAGCTGA GTGCTATGAA CAAGCTTTTG | 300 |
ATGGAAGAGA ATGATCGTTT GCAGAAGCAA GTCTCCAACT TGGTTTATGA | 350 |
GAATGGATTC ATGAAACATC GAATCCACAC TGCTTCTGGG ACGACCACAG | 400 |
ACAACAGCTG TGAGTCTGTG GTCGTGAGTG GTCAGCAACG TCAGCAGCAA | 450 |
AACCCAACAC ATCAGCATCC TCAGCGTGAT GTTAACAACC CAGCTAATCT | 500 |
TCTCTCGATT GCGGAGGAGA CCTTGGCGGA GTTCCTTTGC AAGGCTACAG | 550 |
GAACTGCTGT CGACTGGGTC CAGATGATTG GGATGAAGCC TGGTCCGGAT | 600 |
TCTATTGGTA TCGTAGCTGT TTCACGCAAC TGCAGTGGAA TAGCAGCACG | 650 |
TGCCTGTGGC CTCGTGAGTT TAGAACCCAT GAAGGTCGCT GAAATCCTCA | 700 |
AAGATCGTCC ATCTTGGTTC CGTGACTGTC GATGTGTCGA GACTCTGAAT | 750 |
GTTATACCCA CTGGAAATGG TGGTACTATC GAGCTTGTCA ACACTCAGAT | 800 |
TTATGCTCCT ACAACATTAG CAGCAGCTCG TGACTTTTGG ACGCTGAGAT | 850 |
ATAGTACAAG TCTAGAAGAT GGAAGCTATG TGGTCTGTGA GAGATCACTC | 900 |
ACTTCTGCAA CTGGTGGCCC CAATGGTCCA CTTTCTTCAA GCTTCGTGAG | 950 |
AGCCAAAATG CTGTCAAGCG GGTTTCTTAT CCGTCCTTGT GATGGTGGTG | 1000 |
GTTCCATTAT TCACATCGTT GATCATGTGG ACTTGGATGT CTCAAGTGTT | 1050 |
CCTGAAGTCC TCAGGCCTCT TTATGAGTCT TCCAAAATCC TTGCTCAAAA | 1100 |
AATGACTGTC GCTGCTCTGA GACATGTGCG CCAAATTGCT CAAGAGACTA | 1150 |
GTGGAGAAGT CCAGTATAGT GGTGGACGCC AGCCTGCAGT TTTAAGGACT | 1200 |
TTCAGCCAGA GACTCTGCCG GGGTTTCAAT GATGCTGTAA ATGGTTTTGT | 1250 |
CGATGATGGA TGGTCTCCAA TGAGTAGTGA TGGAGGAGAG GATATTACGA | 1300 |
TCATGATTAA CTCTTCCTCT GCTAAATTTG CTGGCTCCCA ATACGGTAGC | 1350 |
TCATTTCTTC CAAGTTTTGG AAGTGGTGTC CTCTGTGCCA AAGCTTCTAT | 1400 |
GCTGTTGCAG AATGTTCCAC CCCTTGTATT GATTCGGTTC CTGAGAGAAC | 1450 |
ACCGAGCTGA ATGGGCAGAC TATGGTGTCG ATGCCTATTC TGCTGCATCT | 1500 |
CTCAGAGCAA CTCCATATGC TGTTCCATGC GTCAGAACCG GTGGGTTCCC | 1550 |
GAGTAACCAA GTCATTCTTC CTCTCGCACA GACACTCGAA CATGAAGAGT | 1600 |
TTCTCGAAGT GGTTAGACTT GGAGGTCATG CTTACTCACC TGAAGACATG | 1650 |
GGCTTATCCC GGGATATGTA TTTACTGCAG CTTTGTAGCG GCGTTGATGA | 1700 |
AAATGTGGTT GGAGGTTGTG CTCAGCTTGT CTTTGCCCCA ATCGATGAAT | 1750 |
CATTTGCTGA TGATGCACCT TTGCTTCCTT CTGGTTTCCG TGTCATACCA | 1800 |
CTCGACCAAA AAACAAATCC GAATGATCAT CAATCTGCAA GTCGAACACG | 1850 |
GGATCTAGCA TCGTCCCTAG ATGGTTCCAC CAAAACCGAT TCGGAAACAA | 1900 |
ACTCTAGATT GGTCTTAACA ATAGCCTTCC AGTTCACGTT TGATAACCAT | 1950 |
TCCAGAGACA ATGTTGCTAC AATGGCGAGA CAGTATGTGA GGAACGTTGT | 2000 |
TGGTTCGATT CAGAGAGTGG CTCTAGCCAT TACGCCTCGT CCTGGCTCAA | 2050 |
TGCAACTTCC CACTTCCCCT GAAGCTCTCA CTCTTGTCCG TTGGATCACC | 2100 |
CGTAGTTACA GTATTCATAC AGGTGCAGAT CTGTTTGGAG CTGATTCTCA | 2150 |
GTCCTGTGGA GGAGACACAT TGCTTAAGCA ACTCTGGGAC CATAGTGATG | 2200 |
CCATATTGTG CTGCTCCCTG AAAACTAATG CCTCACCGGT ATTCACATTT | 2250 |
GCAAACCAAG CTGGTTTAGA CATGCTTGAA ACTACACTTG TGGCACTTCA | 2300 |
GGATATAATG CTCGACAAAA CACTTGATGA CTCTGGTCGT AGAGCTCTTT | 2350 |
GCTCCGAGTT CGCCAAGATC ATGCAGCAGG GATATGCGAA TCTTCCGGCA | 2400 |
GGAATATGTG TGTCGAGCAT GGGCAGACCG GTTTCGTATG AGCAAGCGAC | 2450 |
GGTGTGGAAA GTTGTTGATG ACAACGAATC AAACCACTGC TTGGCTTTTA | 2500 |
CCCTCGTTAG TTGGTCGTTT GTTTGA | 2550 |
>AT1G30490.1 longest ORF length:841
MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ | 50 |
LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL | 100 |
MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ | 150 |
NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD | 200 |
SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN | 250 |
VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL | 300 |
TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV | 350 |
PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT | 400 |
FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS | 450 |
SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS | 500 |
LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM | 550 |
GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP | 600 |
LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH | 650 |
SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT | 700 |
RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF | 750 |
ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA | 800 |
GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V | 850 |