fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G32770 NST3, ANAC012, SND1 SECONDARY WALL-ASSOCIATED NAC DOMAIN 1, NAC SECONDARY WALL THICKENING PROMOTING 3, NAC domain containing protein 12 (.1)

>AT1G32770.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 607
HindIII A|AGCTT 163
HpaI GTT|AAC 112
PstI CTGCA|G 327
SacI GAGCT|C 383
SalI G|TCGAC 781
StyI C|C[AT][AT]GG 172


Click here to view TAIR data

>AT1G32770.1 length:1077
ATGGCTGATA ATAAGGTCAA TCTTTCGATT AATGGACAAT CAAAAGTGCC 
50
TCCAGGTTTC AGATTCCATC CCACCGAAGA AGAACTTCTC CATTACTATC 
100
TCCGTAAGAA AGTTAACTCT CAAAAGATCG ATCTTGATGT CATTCGTGAA 
150
GTTGATCTAA ACAAGCTTGA GCCTTGGGAT ATTCAAGAGG AATGTAGAAT 
200
CGGTTCAACG CCACAAAACG ACTGGTACTT CTTCAGCCAC AAGGACAAGA 
250
AGTATCCAAC CGGGACCAGG ACGAACCGGG CAACAGTCGC TGGATTCTGG 
300
AAAGCTACCG GACGTGACAA AATCATCTGC AGTTGTGTCC GGAGAATTGG 
350
ACTGAGGAAG ACACTCGTGT TCTACAAAGG AAGAGCTCCT CACGGTCAGA 
400
AATCCGACTG GATCATGCAT GAGTATCGCC TCGACGATAC TCCAATGTCT 
450
AATGGCTATG CTGATGTTGT TACAGAAGAT CCAATGAGCT ATAACGAAGA 
500
AGGTTGGGTG GTATGTCGAG TGTTCAGGAA GAAGAACTAT CAAAAGATTG 
550
ACGATTGTCC TAAAATCACT CTATCTTCTT TACCTGATGA CACGGAGGAA 
600
GAGAAGGGGC CCACCTTTCA CAACACTCAA AACGTTACCG GTTTAGACCA 
650
TGTTCTTCTC TACATGGACC GTACCGGTTC TAACATTTGC ATGCCCGAGA 
700
GCCAAACAAC GACTCAACAT CAAGATGATG TCTTATTCAT GCAACTCCCA 
750
AGTCTTGAGA CACCTAAATC CGAGAGCCCG GTCGACCAAA GTTTCCTGAC 
800
TCCAAGCAAA CTCGATTTCT CTCCCGTTCA AGAGAAGATA ACCGAAAGAC 
850
CGGTTTGCAG CAACTGGGCT AGTCTTGACC GGCTCGTAGC TTGGCAATTG 
900
AACAATGGTC ATCATAATCC GTGTCATCGT AAGAGTTTTG ATGAAGAAGA 
950
AGAAAATGGT GATACTATGA TGCAGCGATG GGATCTTCAT TGGAATAATG 
1000
ATGATAATGT TGATCTTTGG AGTAGTTTCA CTGAGTCTTC TTCGTCTTTA 
1050
GACCCACTTC TTCATTTATC TGTATGA
1100

>AT1G32770.1 longest ORF length:358
MADNKVNLSI NGQSKVPPGF RFHPTEEELL HYYLRKKVNS QKIDLDVIRE 
50
VDLNKLEPWD IQEECRIGST PQNDWYFFSH KDKKYPTGTR TNRATVAGFW 
100
KATGRDKIIC SCVRRIGLRK TLVFYKGRAP HGQKSDWIMH EYRLDDTPMS 
150
NGYADVVTED PMSYNEEGWV VCRVFRKKNY QKIDDCPKIT LSSLPDDTEE 
200
EKGPTFHNTQ NVTGLDHVLL YMDRTGSNIC MPESQTTTQH QDDVLFMQLP 
250
SLETPKSESP VDQSFLTPSK LDFSPVQEKI TERPVCSNWA SLDRLVAWQL 
300
NNGHHNPCHR KSFDEEEENG DTMMQRWDLH WNNDDNVDLW SSFTESSSSL 
350
DPLLHLSV
400