fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G35460 bHLH080 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G35460.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 83
EcoRV GAT|ATC 480
PstI CTGCA|G 668
PvuII CAG|CTG 451
SalI G|TCGAC 387
XbaI T|CTAGA 421


Click here to view TAIR data

>AT1G35460.1 length:780
ATGCAATCCA CTCATATAAG CGGCGGAAGT AGCGGTGGTG GTGGTGGAGG 
50
AGGAGGAGAG GTGAGTCGAA GTGGATTATC TCGGATCCGT TCAGCTCCAG 
100
CTACTTGGAT TGAAACCCTA CTCGAAGAAG ATGAAGAAGA AGGTTTAAAA 
150
CCTAACCTTT GTTTAACAGA GCTGCTTACT GGTAATAATA ACTCTGGAGG 
200
AGTGATAACG AGTCGTGACG ACTCGTTCGA GTTCCTGAGT TCTGTTGAGC 
250
AAGGATTGTA TAATCATCAT CAAGGTGGTG GCTTTCACCG TCAGAATAGT 
300
TCTCCGGCTG ATTTTCTTAG TGGGTCTGGT TCTGGGACTG ATGGGTATTT 
350
CTCTAATTTT GGTATTCCGG CGAATTATGA CTATTTGTCG ACCAACGTTG 
400
ATATTTCTCC GACTAAACGG TCTAGAGATA TGGAAACACA GTTTTCTTCT 
450
CAGCTGAAAG AAGAGCAAAT GAGTGGTGGG ATATCAGGAA TGATGGATAT 
500
GAACATGGAC AAGATTTTTG AGGATTCAGT TCCTTGTAGG GTTCGTGCTA 
550
AACGTGGTTG TGCTACTCAT CCTCGTAGCA TTGCTGAACG GGTGAGAAGA 
600
ACGCGAATAA GTGATCGGAT TAGGAGGCTG CAAGAGCTTG TTCCTAACAT 
650
GGATAAGCAA ACCAACACTG CAGACATGTT GGAAGAAGCT GTGGAGTATG 
700
TGAAGGCTCT TCAAAGCCAG ATCCAGGAAT TGACAGAGCA GCAGAAGAGA 
750
TGCAAATGCA AACCTAAAGA AGAACAATAA 
800

>AT1G35460.1 longest ORF length:259
MQSTHISGGS SGGGGGGGGE VSRSGLSRIR SAPATWIETL LEEDEEEGLK 
50
PNLCLTELLT GNNNSGGVIT SRDDSFEFLS SVEQGLYNHH QGGGFHRQNS 
100
SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS 
150
QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR 
200
TRISDRIRRL QELVPNMDKQ TNTADMLEEA VEYVKALQSQ IQELTEQQKR 
250
CKCKPKEEQ
300