Locus |
Common name |
Short description |
AT1G35460 |
bHLH080 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT1G35460.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
83 |
EcoRV
| GAT|ATC |
480 |
PstI
| CTGCA|G |
668 |
PvuII
| CAG|CTG |
451 |
SalI
| G|TCGAC |
387 |
XbaI
| T|CTAGA |
421 |
Click here to view TAIR data
>AT1G35460.1 length:780
ATGCAATCCA CTCATATAAG CGGCGGAAGT AGCGGTGGTG GTGGTGGAGG | 50 |
AGGAGGAGAG GTGAGTCGAA GTGGATTATC TCGGATCCGT TCAGCTCCAG | 100 |
CTACTTGGAT TGAAACCCTA CTCGAAGAAG ATGAAGAAGA AGGTTTAAAA | 150 |
CCTAACCTTT GTTTAACAGA GCTGCTTACT GGTAATAATA ACTCTGGAGG | 200 |
AGTGATAACG AGTCGTGACG ACTCGTTCGA GTTCCTGAGT TCTGTTGAGC | 250 |
AAGGATTGTA TAATCATCAT CAAGGTGGTG GCTTTCACCG TCAGAATAGT | 300 |
TCTCCGGCTG ATTTTCTTAG TGGGTCTGGT TCTGGGACTG ATGGGTATTT | 350 |
CTCTAATTTT GGTATTCCGG CGAATTATGA CTATTTGTCG ACCAACGTTG | 400 |
ATATTTCTCC GACTAAACGG TCTAGAGATA TGGAAACACA GTTTTCTTCT | 450 |
CAGCTGAAAG AAGAGCAAAT GAGTGGTGGG ATATCAGGAA TGATGGATAT | 500 |
GAACATGGAC AAGATTTTTG AGGATTCAGT TCCTTGTAGG GTTCGTGCTA | 550 |
AACGTGGTTG TGCTACTCAT CCTCGTAGCA TTGCTGAACG GGTGAGAAGA | 600 |
ACGCGAATAA GTGATCGGAT TAGGAGGCTG CAAGAGCTTG TTCCTAACAT | 650 |
GGATAAGCAA ACCAACACTG CAGACATGTT GGAAGAAGCT GTGGAGTATG | 700 |
TGAAGGCTCT TCAAAGCCAG ATCCAGGAAT TGACAGAGCA GCAGAAGAGA | 750 |
TGCAAATGCA AACCTAAAGA AGAACAATAA | 800 |
>AT1G35460.1 longest ORF length:259
MQSTHISGGS SGGGGGGGGE VSRSGLSRIR SAPATWIETL LEEDEEEGLK | 50 |
PNLCLTELLT GNNNSGGVIT SRDDSFEFLS SVEQGLYNHH QGGGFHRQNS | 100 |
SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS | 150 |
QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR | 200 |
TRISDRIRRL QELVPNMDKQ TNTADMLEEA VEYVKALQSQ IQELTEQQKR | 250 |
CKCKPKEEQ | 300 |
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