Locus |
Common name |
Short description |
AT1G46480 |
WOX4 |
WUSCHEL related homeobox 4 (.1) |
>AT1G46480.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, Tth111I, XbaI, XcmI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
431 |
AciI
| C|CGC |
430 |
AflIII
| A|CPuPyGT |
616 |
AgeI
| A|CCGGT |
199 |
AluI
| AG|CT |
74, 105, 485, 623, 723 |
ApoI
| Pu|AATTPy |
211 |
AvaI
| C|PyCGPuG |
255, 721 |
AvaII
| G|G[AT]CC |
201 |
BfaI
| C|TAG |
548 |
BsaHI
| GPu|CGPyC |
148 |
BsaJI
| C|CNNGG |
255 |
BsaWI
| [AT]|CCGG[AT] |
199 |
BsmI
| GAATGCN| |
324 |
BsoBI
| C|PyCGPuG |
255, 721 |
BspHI
| T|CATGA |
9 |
BsrFI
| Pu|CCGGPy |
199 |
BsrGI
| T|GTACA |
311 |
BsrI
| ACTGGN| |
499 |
BssKI
| |CCNGG |
254 |
BstBI
| TT|CGAA |
18 |
BstUI
| CG|CG |
431 |
Cac8I
| GCN|NGC |
430 |
Cfr10I
| [AG]|CCGG[TC] |
199 |
DdeI
| C|TNAG |
66, 72, 103, 471 |
DpnI
| GA-CH3|TC |
41, 191 |
DpnII
| |GATC |
41, 191 |
Fnu4HI
| GC|NGC |
76, 115, 484 |
HinfI
| G|ANTC |
51, 278 |
HpaII
| C|CGG |
111, 144, 198, 254 |
Hpy188I
| TCN|GA |
203, 512 |
HpyCH4V
| TG|CA |
77, 363 |
MboI
| |GATC |
41, 191 |
MfeI
| C|AATTG |
241 |
MseI
| T|TAA |
171, 507, 693 |
MspI
| C|CGG |
111, 144, 198, 254 |
MwoI
| GCNNNNN|NNGC |
76, 475 |
NciI
| CC|[CG]GG |
254 |
NlaIII
| CATG| |
8, 47, 615 |
NlaIV
| GGN|NCC |
272, 413 |
NspI
| PuCATG|Py |
616 |
PaeR7I
| C|TCGAG |
721 |
PciI
| A|CATGT |
616 |
RsaI
| GT|AC |
310, 327, 376, 604, 675 |
RsrII
| CG|G[AT]CCG |
202 |
Sau3AI
| |GATC |
41, 191 |
Sau96I
| G|GNCC |
201 |
ScaI
| AGT|ACT |
676 |
ScrFI
| CC|NGG |
254 |
SmaI
| CCC|GGG |
255 |
SmlI
| C|TPyPuAG |
281, 301, 721 |
Taqƒ¿I
| T|CGA |
17, 53, 387, 720 |
TliI
| C|TCGAG |
721 |
TseI
| G|C[AT]GC |
76, 115, 484 |
Tsp45I
| |GT[CG]AC |
150, 545 |
Tsp509I
| |AATT |
210, 240 |
TspRI
| NNCA[CG]TGNN| |
499 |
XhoI
| C|TCGAG |
721 |
XmaI
| C|CCGGG |
255 |
Click here to view TAIR data
>AT1G46480.1 length:756
ATGAAGGTTC ATGAGTTTTC GAATGGGTTT TCTTCATCGT GGGATCAACA | 50 |
TGACTCGACA TCATCCCTTA GCCTAAGCTG CAAACGCCTC CGTCCTCTCG | 100 |
CCCCTAAGCT CTCCGGCAGC CCTCCCTCCC CTCCTTCTTC TTCCTCCGGC | 150 |
GTCACTTCAG CCACTTTTGA CCTTAAAAAC TTCATTAGAC CCGATCAAAC | 200 |
CGGTCCGACA AAATTTGAAC ACAAACGAGA CCCTCCTCAT CAATTGGAGA | 250 |
CGCACCCGGG AGGGACAAGG TGGAACCCGA CTCAAGAACA GATAGGGATA | 300 |
CTTGAGATGT TGTACAAAGG TGGAATGCGT ACTCCTAATG CTCAACAGAT | 350 |
TGAGCATATC ACATTGCAAC TCGGTAAGTA CGGGAAAATC GAAGGGAAAA | 400 |
ATGTGTTCTA TTGGTTCCAG AACCACAAAG CCCGCGAGAG ACAGAAGCAG | 450 |
AAGAGGAACA ACCTCATCAG CCTAAGTTGC CAAAGCAGCT TCACGACCAC | 500 |
TGGTGTCTTT AATCCGAGTG TAACTATGAA GACAAGAACA TCATCGTCAC | 550 |
TAGACATTAT GAGAGAACCA ATGGTGGAGA AGGAGGAGTT AGTGGAAGAG | 600 |
AATGAGTACA AGAGGACATG TAGGAGCTGG GGATTTGAGA ACTTGGAGAT | 650 |
AGAGAACAGG AGAAACAAAA ATAGTAGTAC TATGGCAACT ACTTTTAATA | 700 |
AAATCATTGA CAATGTAACC CTCGAGCTTT TTCCTCTCCA TCCTGAAGGG | 750 |
AGATGA | 800 |
>AT1G46480.1 longest ORF length:251
MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG | 50 |
VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI | 100 |
LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ | 150 |
KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE | 200 |
NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG | 250 |
R | 300 |
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