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| Locus | Common name | Short description |
| AT1G53230 | TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (.1) |
>AT1G53230.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstXI, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmlI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 1091 |
| AccII(FnuDII) | CG|CG | 194 |
| AciI | C|CGC | 38, 303, 342, 366, 416, 422, 810 |
| AluI | AG|CT | 208, 271, 295, 324, 517, 547, 563, 728, 802, 879 |
| AlwNI | CAGNNN|CTG | 671 |
| ApoI | Pu|AATTPy | 757, 1075 |
| AvaI | C|PyCGPuG | 1024 |
| AvaII | G|G[AT]CC | 180, 645, 897 |
| BanI | G|GPyPuCC | 3 |
| BfaI | C|TAG | 47, 776 |
| BglII | A|GATCT | 609 |
| BlpI | GC|TNAGC | 323 |
| BsaAI | PyAC|GTPu | 185 |
| BsaHI | GPu|CGPyC | 495 |
| BsaJI | C|CNNGG | 334, 1024 |
| BsaWI | [AT]|CCGG[AT] | 432, 543, 753, 823, 1081 |
| BsiHKAI | G[AT]GC[AT]|C | 1123 |
| BslI | CCNNNNN|NNGG | 588, 759 |
| BsoBI | C|PyCGPuG | 1024 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1123 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 3 |
| BsrFI | Pu|CCGGPy | 191 |
| BsrGI | T|GTACA | 169 |
| BssKI | |CCNGG | 1023, 1047 |
| BstNI | CC|[AT]GG | 1047 |
| BstUI | CG|CG | 194 |
| BstYI | Pu|GATCPy | 609 |
| BstZ17I | GTA|TAC | 1091 |
| Cac8I | GCN|NGC | 727 |
| Cfr10I | [AG]|CCGG[TC] | 191 |
| DdeI | C|TNAG | 23, 206, 322 |
| DpnI | GA-CH3|TC | 257, 314, 608, 941, 989 |
| DpnII | |GATC | 257, 314, 608, 941, 989 |
| EaeI | Py|GGCCPu | 687 |
| EcoO109I | PuG|GNCCPy | 898 |
| EcoRI | G|AATTC | 1075 |
| Fnu4HI | GC|NGC | 38, 94, 366, 372, 801, 1129 |
| HaeIII | GG|CC | 686 |
| HhaI | GCG|C | 193 |
| HinP1I | G|CGC | 193 |
| HincII | GTPy|PuAC | 135, 359 |
| HinfI | G|ANTC | 27, 202, 221, 454, 477, 504, 510, 714, 740, 807, 926, 1028, 1161 |
| HpaII | C|CGG | 190, 431, 491, 542, 684, 752, 813, 822, 1023, 1080 |
| Hpy188I | TCN|GA | 212, 457, 507, 796, 1158 |
| Hpy99I | CG[AT]CG| | 34, 73, 214, 721, 794, 847 |
| HpyCH4III | ACN|GT | 82, 581, 1100 |
| HpyCH4IV | A|CGT | 184, 792 |
| HpyCH4V | TG|CA | 855, 1054 |
| MboI | |GATC | 257, 314, 608, 941, 989 |
| MseI | T|TAA | 407, 912, 1171 |
| MslI | CAPyNN|NNPuTG | 922 |
| MspA1I | C[AC]G|C[GT]G | 371, 803 |
| MspI | C|CGG | 190, 431, 491, 542, 684, 752, 813, 822, 1023, 1080 |
| MwoI | GCNNNNN|NNGC | 216, 303, 372, 810 |
| N.BstNBI | GAGTCNNNN|N | 745 |
| NciI | CC|[CG]GG | 1023 |
| NlaIII | CATG| | 783, 976 |
| NlaIV | GGN|NCC | 3, 338, 897 |
| PmlI | CAC|GTG | 185 |
| PpuMI | PuG|G[AT]CCPy | 898 |
| PshAI | GACNN|NNGTC | 780 |
| PspGI | |CC[AT]GG | 1047 |
| PvuII | CAG|CTG | 803 |
| RsaI | GT|AC | 110, 168, 819 |
| Sau3AI | |GATC | 257, 314, 608, 941, 989 |
| Sau96I | G|GNCC | 180, 645, 897 |
| ScrFI | CC|NGG | 1023, 1047 |
| SmaI | CCC|GGG | 1024 |
| SpeI | A|CTAGT | 777 |
| StyI | C|C[AT][AT]GG | 334 |
| Taqƒ¿I | T|CGA | 259, 451, 479, 512, 719 |
| TfiI | G|A[AT]TC | 27, 221, 454, 477, 504, 510, 807, 926, 1028, 1161 |
| TseI | G|C[AT]GC | 372, 801 |
| Tsp45I | |GT[CG]AC | 121, 187, 584, 749 |
| Tsp509I | |AATT | 225, 409, 756, 1074 |
| TspRI | NNCA[CG]TGNN| | 985 |
| XbaI | T|CTAGA | 48 |
| XmaI | C|CCGGG | 1024 |
Click here to view TAIR data
>AT1G53230.1 length:1176
ATGGCACCAG ATAACGACCA TTTCTTAGAT TCTCCGTCGC CGCCTCTTCT | 50 |
AGAGATGAGA CACCACCAAT CAGCGACGGA GAACGGTGGT GGTTGCGGCG | 100 |
AGATTGTGGA GGTACAAGGA GGTCACATTG TTCGGTCAAC AGGAAGAAAA | 150 |
GACAGACATA GTAAAGTATG TACAGCGAAA GGACCACGTG ACCGGCGCGT | 200 |
GAGACTCTCA GCTCCGACGG CGATTCAATT CTACGATGTT CAAGATAGAC | 250 |
TTGGTTTTGA TCGACCAAGT AAAGCTGTTG ATTGGCTTAT TACTAAAGCT | 300 |
AAATCCGCCA TTGATGATCT TGCTCAGCTT CCTCCTTGGA ACCCCGCCGA | 350 |
TACTCTTCGT CAACACGCCG CCGCTGCTGC TAACGCTAAA CCCAGAAAAA | 400 |
CCAAAACTTT AATTTCTCCG CCACCGCCAC AACCGGAAGA AACAGAGCAT | 450 |
CATCGAATCG GAGAAGAAGA AGATAACGAA TCGAGTTTTC TTCCGGCGTC | 500 |
AATGGATTCT GATTCGATAG CTGACACTAT AAAGTCGTTT TTTCCGGTAG | 550 |
CTTCAACGCA ACAGAGCTAT CATCATCAGC CACCGTCACG AGGCAATACA | 600 |
CAGAACCAAG ATCTTCTTCG TCTCTCGCTT CAATCTTTCC AAAATGGTCC | 650 |
ACCTTTTCCT AATCAAACAG AACCTGCTCT GTTCTCCGGC CAGAGCAATA | 700 |
ATCAGTTAGC GTTTGACTCA TCGACGGCAA GCTGGGAACA GAGTCATCAG | 750 |
TCACCGGAAT TTGGAAAGAT ACAGAGACTA GTGTCATGGA ACAACGTCGG | 800 |
AGCAGCTGAA TCCGCCGGAA GTACCGGAGG ATTTGTGTTT GCTTCTCCGT | 850 |
CGTCGTTGCA TCCAGTTTAT AGCCAAAGTC AGCTTTTATC ACAGAGGGGT | 900 |
CCCCTTCAGT CCATTAACAC ACCTATGATT CGTGCTTGGT TTGATCCTCA | 950 |
CCATCATCAT CATCATCATC AGCAGTCCAT GACCACTGAC GATCTCCACC | 1000 |
ATCATCATCC CTACCATATC CCTCCCGGGA TTCACCAATC TGCTATTCCA | 1050 |
GGCATTGCAT TTGCTTCAAG TGGTGAATTC TCCGGTTTTC GTATACCAGC | 1100 |
ACGGTTTCAA GGCGAACAAG AGGAGCACGG CGGCGACAAC AAGCCGTCCT | 1150 |
CTGCTTCATC CGATTCTCGC CATTAA | 1200 |
>AT1G53230.1 longest ORF length:391
MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK | 50 |
DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA | 100 |
KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH | 150 |
HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT | 200 |
QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ | 250 |
SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG | 300 |
PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP | 350 |
GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H | 400 |