Alias
TCP3
TF Classification
FioreDB TCP (Click to show phylogenetic tree)
RARTF TCP
AtTFDB TCP
PlnTFDB TCP (v3.0), TCP (v1.0)
DATF TCP
TAIR short description
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 (.1)
TAIR annotation
Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. (.1)
Gene model
Entry clone (w/o stop)
RE_0989_x
External link
Gene Ontology (GO)
(P) 30154: other cellular processes
->cell differentiation
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(P) 45962: other biological processes
->positive regulation of development, heterochronic
(P) 48366: developmental processes
->leaf development
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent
->regulation of transcription, DNA-templated
(P) 9733: other biological processes
->response to auxin
(P) 9965: developmental processes
->leaf morphogenesis
miRNA/tasiRNA
Target sequence
miRNA/tasiRNA sequence
Map
5'--3'
miR319a: 3'-TCCCTCGAGGGAAGTCAGGTT-5'
5'--3'
miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
1
2
soybean
1
1
2
rice
sorghum
physcomitrella
1
1
Total
1
1
1
2
5
Repression motif
Repression motif in putative orthologs
DLGHQDLRLSL QSFQD at 221/391 in soybean Gm016057 (Type III)
DLGQQDLRLSL QSFQD at 203/371 in soybean Gm033704 (Type Ia)
SSQSQDLRLSL QSFQE at 218/414 in poplar Pt032683 (Type II)
SSQSQDLRLSL LSFQG at 214/408 in poplar Pt024326 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
cotyledon, leaf, sepal, petal, stamen, silique,
serrated leaf (direct input),
abnormal petal (direct input),
abnormal seedling (direct input),
abnormal sepal (direct input),
abnormal shaped silique (direct input),
short silique (direct input),
adventitious shoot formation (direct input),
abnormal stamen (direct input)
CRES-T phenotype from publication
abnormal seedling, rough surface leaf, serrated leaf, abnormal shaped leaf, aberrant margin, abnormal petal, short root, abnormal shaped silique, abnormal sepal, sterile or low fertility (PMID17307931 )
CRES-T phenotype from bulk project
Phenotype in ornamental plants
ID
Species
Construct
Date
Comment
Phenotype
Photo
ID40
Chrysanthemum
35S:AtCDS-SRDX
2005-08-18
 
serrated and incurving leaves, dark green leaves, defect of ray floret, disk floret and involucre [Publication link]
and more...
ID52
Gentiana
rolCp:AtCDS-SRDX
2005-08-31
 
No phenotype 
 
ID71
Chrysanthemum
35S:AtCDS-RmD
2006-01-06
 
no phenotype (same as wild type) 
 
ID72
Chrysanthemum
35S:AtCDS
2006-01-06
 
no phenotype (same as wild type) 
 
ID118
Eustoma
35S:AtCDS-SRDX
2006-06-27
 
 
 
ID154
Pharbitis
35S:AtCDS-SRDX
2006-10-18
 
narrow robes and rounded lobe leaf [Publication link]
ID50002
Torenia
35S:AtCDS-SRDX
2005-05-18
 
serrated leaves; serrated, curly and parti-colored petals;  [Publication link]
and more...
ID50020
Torenia
35S:AtCDS
2006-01-06
 
no phenotype (same as wild type) 
 
ID50021
Torenia
35S:AtCDS-RmD
2006-01-06
 
no phenotype (same as wild type) 
 
ID53
Cyclamen
35S:AtCDS-SRDX
2005-09-08
 
serrated hyponastic leaves, small petal 
 
ID179
Cyclamen
35S:CpOrtholog-SRDX
2006-11-24
 
serrated hyponastic leaves, small petal [Publication link]
and more...
ID180
Cyclamen
35S:At_miR
2007-02-26
(miR319/JAW ove) 
serrated hyponastic leaves, small petal 
 
ID590
Rosa
35S:AtCDS-SRDX
2008-10-01
 
serrated leaf and petal, more complicated compound leaf,
leaf-like sepal [Publication link]
and more...
Comment