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| Locus | Common name | Short description |
| AT1G55580 | SCL18, LAS | SCARECROW-LIKE 18, Lateral Suppressor, GRAS family transcription factor (.1) |
>AT1G55580.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AflIII, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BssHII, BssSI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, StyI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 505 |
| AciI | C|CGC | 45, 96, 105, 138, 171, 637, 1034 |
| AclI | AA|CGTT | 1186 |
| AgeI | A|CCGGT | 689 |
| AhdI | GACNNN|NNGTC | 423 |
| AluI | AG|CT | 23, 493, 529, 793, 905, 943, 1199, 1216, 1221 |
| ApoI | Pu|AATTPy | 147 |
| BanII | GPuGCPy|C | 530 |
| BfaI | C|TAG | 21, 593, 615, 740, 915, 1061 |
| BglII | A|GATCT | 759 |
| BlpI | GC|TNAGC | 1220 |
| BsaAI | PyAC|GTPu | 318 |
| BsaJI | C|CNNGG | 92, 353 |
| BsaWI | [AT]|CCGG[AT] | 646, 667, 689 |
| BsiEI | CGPuPy|CG | 95, 654 |
| BsiHKAI | G[AT]GC[AT]|C | 530 |
| BsiWI | C|GTACG | 270 |
| BslI | CCNNNNN|NNGG | 1251 |
| Bsp1286I | G[GAT]GC[CAT]|C | 530 |
| BsrFI | Pu|CCGGPy | 689 |
| BsrGI | T|GTACA | 243 |
| BsrI | ACTGGN| | 682 |
| BssKI | |CCNGG | 697 |
| BstAPI | GCANNNN|NTGC | 373 |
| BstBI | TT|CGAA | 395 |
| BstF5I | GGATGNN| | 650, 1096 |
| BstUI | CG|CG | 505 |
| BstYI | Pu|GATCPy | 759, 782 |
| BtgI | C|CPuPyGG | 353 |
| BtsI | GCAGTGNN| | 370, 990 |
| Cac8I | GCN|NGC | 588, 1295 |
| Cfr10I | [AG]|CCGG[TC] | 689 |
| DdeI | C|TNAG | 800, 982, 1219, 1230 |
| DpnI | GA-CH3|TC | 293, 745, 758, 781, 877, 898, 956, 992, 1006 |
| DpnII | |GATC | 293, 745, 758, 781, 877, 898, 956, 992, 1006 |
| EaeI | Py|GGCCPu | 95 |
| EagI | C|GGCCG | 95 |
| EcoNI | CCTNN|NNNAGG | 1251 |
| Fnu4HI | GC|NGC | 96, 141, 174, 1034, 1104 |
| HaeIII | GG|CC | 94, 573 |
| HincII | GTPy|PuAC | 693, 1183 |
| HindIII | A|AGCTT | 1200, 1222 |
| HinfI | G|ANTC | 62, 225, 274, 423, 708, 919, 976, 1014 |
| HpaI | GTT|AAC | 693, 1183 |
| HpaII | C|CGG | 645, 666, 688, 697, 765 |
| Hpy188I | TCN|GA | 33, 296, 414, 784, 981, 1136, 1248 |
| Hpy99I | CG[AT]CG| | 123, 325, 503, 508, 863, 1027, 1324 |
| HpyCH4III | ACN|GT | 280, 309, 354, 383, 1070 |
| HpyCH4IV | A|CGT | 317, 1028, 1185 |
| HpyCH4V | TG|CA | 77, 374, 585 |
| MboI | |GATC | 293, 745, 758, 781, 877, 898, 956, 992, 1006 |
| MfeI | C|AATTG | 831 |
| MseI | T|TAA | 204, 479, 671, 692, 858, 908, 1182, 1272 |
| MslI | CAPyNN|NNPuTG | 742 |
| MspA1I | C[AC]G|C[GT]G | 140 |
| MspI | C|CGG | 645, 666, 688, 697, 765 |
| MwoI | GCNNNNN|NNGC | 105, 373, 492, 801 |
| N.BstNBI | GAGTCNNNN|N | 428 |
| NciI | CC|[CG]GG | 697 |
| NlaIII | CATG| | 950, 1000 |
| PmlI | CAC|GTG | 318 |
| PsiI | TTA|TAA | 1257 |
| RsaI | GT|AC | 242, 269, 806 |
| SacI | GAGCT|C | 530 |
| Sau3AI | |GATC | 293, 745, 758, 781, 877, 898, 956, 992, 1006 |
| ScrFI | CC|NGG | 697 |
| SfcI | C|TPuPyAG | 778 |
| SmlI | C|TPyPuAG | 1214 |
| SspI | AAT|ATT | 855 |
| Taqƒ¿I | T|CGA | 394, 420, 501, 655 |
| TfiI | G|A[AT]TC | 62, 274, 919, 976, 1014 |
| TseI | G|C[AT]GC | 141 |
| Tsp45I | |GT[CG]AC | 883 |
| Tsp509I | |AATT | 146, 410, 723, 830, 1277 |
| TspRI | NNCA[CG]TGNN| | 370, 990 |
| XbaI | T|CTAGA | 916 |
| XmnI | GAANN|NNTTC | 976 |
Click here to view TAIR data
>AT1G55580.1 length:1338
ATGCTTACTT CCTTCAAATC CTCTAGCTCC TCCTCCGAAG ATGCCACCGC | 50 |
TACCACCACC GAGAATCCTC CTCCTTTGTG CATCGCCTCC TCCTCGGCCG | 100 |
CAACCTCCGC CTCACATCAC CTCCGTCGTC TTCTTTTCAC CGCTGCGAAT | 150 |
TTCGTCTCCC AGTCAAACTT CACCGCCGCT CAAAACTTAC TCTCAATCCT | 200 |
CTCCCTTAAC TCTTCTCCTC ACGGCGACTC CACCGAGCGA CTTGTACACC | 250 |
TCTTCACTAA AGCCTTGTCC GTACGAATCA ACCGTCAGCA ACAAGATCAG | 300 |
ACGGCTGAAA CGGTTGCCAC GTGGACGACG AACGAAATGA CGATGAGTAA | 350 |
CTCCACGGTG TTCACGAGCA GTGTATGCAA AGAACAGTTC TTGTTTCGAA | 400 |
CCAAGAACAA CAATTCTGAC TTCGAGTCTT GTTACTATCT TTGGCTAAAC | 450 |
CAACTAACGC CGTTTATTCG GTTCGGTCAT TTAACGGCGA ACCAAGCTAT | 500 |
CCTCGACGCG ACGGAGACAA ACGATAACGG AGCTCTACAT ATACTTGATT | 550 |
TAGATATATC ACAAGGACTT CAATGGCCTC CATTGATGCA AGCCCTAGCA | 600 |
GAGAGGTCAT CAAACCCTAG CAGTCCACCT CCATCTCTCC GCATAACCGG | 650 |
ATGCGGTCGA GATGTAACCG GATTAAACCG AACTGGAGAC CGGTTAACCC | 700 |
GGTTCGCTGA CTCTTTAGGT CTCCAATTCC AGTTTCACAC GCTAGTGATC | 750 |
GTAGAAGAAG ATCTCGCCGG ACTTTTGCTA CAGATCCGAT TGTTAGCTCT | 800 |
CTCAGCCGTA CAAGGAGAGA CCATTGCCGT CAATTGTGTT CACTTCCTCC | 850 |
ACAAAATATT TAACGACGAT GGAGATATGA TCGGTCACTT CTTGTCAGCG | 900 |
ATCAAGAGCT TAAACTCTAG AATCGTTACA ATGGCAGAGA GAGAAGCTAA | 950 |
TCATGGAGAT CACTCGTTCT TGAATAGATT CTCTGAGGCA GTGGATCATT | 1000 |
ACATGGCGAT CTTTGATTCG TTGGAAGCGA CGTTGCCGCC AAATAGCCGA | 1050 |
GAGAGACTAA CCCTAGAGCA ACGGTGGTTC GGTAAGGAGA TTTTGGATGT | 1100 |
TGTGGCGGCG GAAGAGACGG AGAGAAAGCA AAGACATCGG AGGTTTGAGA | 1150 |
TTTGGGAAGA GATGATGAAG AGGTTTGGTT TCGTTAACGT TCCTATTGGA | 1200 |
AGCTTTGCTT TGTCTCAAGC TAAGCTTCTT CTTAGACTTC ATTATCCTTC | 1250 |
AGAAGGTTAT AATCTTCAGT TCCTTAACAA TTCTTTGTTT CTTGGCTGGC | 1300 |
AAAATCGTCC CCTCTTCTCC GTTTCGTCGT GGAAATGA | 1350 |
>AT1G55580.1 longest ORF length:445
MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN | 50 |
FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ | 100 |
TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN | 150 |
QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA | 200 |
ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI | 250 |
VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA | 300 |
IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR | 350 |
ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG | 400 |
SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK | 450 |