fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G56650 ATMYB75, SIAA1, PAP1 SUC-INDUCED ANTHOCYANIN ACCUMULATION 1, MYELOBLASTOSIS PROTEIN 75, MYB DOMAIN PROTEIN 75, production of anthocyanin pigment 1 (.1)

>AT1G56650.1 CDS map

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Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, MwoI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsaI, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TfiI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AatII GACGT|C 295
AciI C|CGC 285
AgeI A|CCGGT 128
AluI AG|CT 115, 197
ApoI Pu|AATTPy 613, 736
AseI AT|TAAT 73
AvaII G|G[AT]CC 283
BanI G|GPyPuCC 98
BclI T|GATCA 699
BfaI C|TAG 239, 569, 617
BsaHI GPu|CGPyC 295
BsaJI C|CNNGG 501, 683
BsaWI [AT]|CCGG[AT] 128
BslI CCNNNNN|NNGG 501
BspT107I(HgiCI) G|G[TC][AG]CC 98
BsrFI Pu|CCGGPy 128, 393
BsrI ACTGGN| 308
BssKI |CCNGG 276
BstNI CC|[AT]GG 276
Cfr10I [AG]|CCGG[TC] 128, 393
DdeI C|TNAG 195, 321
DpnI GA-CH3|TC 212, 429, 698
DpnII |GATC 212, 429, 698
Fnu4HI GC|NGC 20
HincII GTPy|PuAC 442, 481
HinfI G|ANTC 710
HpaI GTT|AAC 442
HpaII C|CGG 127, 392
Hpy188I TCN|GA 201, 281, 320
Hpy99I CG[AT]CG| 658
HpyCH4III ACN|GT 65, 338, 438, 729
HpyCH4IV A|CGT 294, 483, 693
HpyCH4V TG|CA 68, 131, 452
MboI |GATC 212, 429, 698
MseI T|TAA 72, 149, 257, 441, 486, 507
MslI CAPyNN|NNPuTG 464
MspI C|CGG 127, 392
N.BstNBI GAGTCNNNN|N 715
NlaIII CATG| 332, 495
NlaIV GGN|NCC 98, 648
PflMI CCANNNN|NTGG 501
PsiI TTA|TAA 414
PspGI |CC[AT]GG 276
RsrII CG|G[AT]CCG 284
Sau3AI |GATC 212, 429, 698
Sau96I G|GNCC 283
ScrFI CC|NGG 276
SexAI A|CC[AT]GGT 277
SmlI C|TPyPuAG 60
SpeI A|CTAGT 570
StyI C|C[AT][AT]GG 501, 683
Taq��I T|CGA 210, 421, 427, 717
TseI G|C[AT]GC 20
Tsp45I |GT[CG]AC 526
Tsp509I |AATT 259, 302, 578, 612, 735
TspRI NNCA[CG]TGNN| 68


Click here to view TAIR data

>AT1G56650.1 length:747
ATGGAGGGTT CGTCCAAAGG GCTGCGAAAA GGTGCTTGGA CTACTGAAGA 
50
AGATAGTCTC TTGAGACAGT GCATTAATAA GTATGGAGAA GGCAAATGGC 
100
ACCAAGTTCC TGTAAGAGCT GGGCTAAACC GGTGCAGGAA AAGTTGTAGA 
150
TTAAGATGGT TGAACTATTT GAAGCCAAGT ATCAAGAGAG GAAAACTTAG 
200
CTCTGATGAA GTCGATCTTC TTCTTCGCCT TCATAGGCTT CTAGGGAATA 
250
GGTGGTCTTT AATTGCTGGA AGATTACCTG GTCGGACCGC AAATGACGTC 
300
AAGAATTACT GGAACACTCA TCTGAGTAAG AAACATGAAC CGTGTTGTAA 
350
GATAAAGATG AAAAAGAGAG ACATTACGCC CATTCCTACA ACACCGGCAC 
400
TAAAAAACAA TGTTTATAAG CCTCGACCTC GATCCTTCAC AGTTAACAAC 
450
GACTGCAACC ATCTCAATGC CCCACCAAAA GTTGACGTTA ATCCTCCATG 
500
CCTTGGACTT AACATCAATA ATGTTTGTGA CAATAGTATC ATATACAACA 
550
AAGATAAGAA GAAAGACCAA CTAGTGAATA ATTTGATTGA TGGAGATAAT 
600
ATGTGGTTAG AGAAATTCCT AGAGGAAAGC CAAGAGGTAG ATATTTTGGT 
650
TCCTGAAGCG ACGACAACAG AAAAGGGGGA CACCTTGGCT TTTGACGTTG 
700
ATCAACTTTG GAGTCTTTTC GATGGAGAGA CTGTGAAATT TGATTAG
750

>AT1G56650.1 longest ORF length:248
MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR 
50
LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV 
100
KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN 
150
DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN 
200
MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD
250