Locus |
Common name |
Short description |
AT1G56650 |
ATMYB75, SIAA1, PAP1 |
SUC-INDUCED ANTHOCYANIN ACCUMULATION 1, MYELOBLASTOSIS PROTEIN 75, MYB DOMAIN PROTEIN 75, production of anthocyanin pigment 1 (.1) |
>AT1G56650.1 CDS map
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Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, MwoI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsaI, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TfiI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
295 |
AciI
| C|CGC |
285 |
AgeI
| A|CCGGT |
128 |
AluI
| AG|CT |
115, 197 |
ApoI
| Pu|AATTPy |
613, 736 |
AseI
| AT|TAAT |
73 |
AvaII
| G|G[AT]CC |
283 |
BanI
| G|GPyPuCC |
98 |
BclI
| T|GATCA |
699 |
BfaI
| C|TAG |
239, 569, 617 |
BsaHI
| GPu|CGPyC |
295 |
BsaJI
| C|CNNGG |
501, 683 |
BsaWI
| [AT]|CCGG[AT] |
128 |
BslI
| CCNNNNN|NNGG |
501 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
98 |
BsrFI
| Pu|CCGGPy |
128, 393 |
BsrI
| ACTGGN| |
308 |
BssKI
| |CCNGG |
276 |
BstNI
| CC|[AT]GG |
276 |
Cfr10I
| [AG]|CCGG[TC] |
128, 393 |
DdeI
| C|TNAG |
195, 321 |
DpnI
| GA-CH3|TC |
212, 429, 698 |
DpnII
| |GATC |
212, 429, 698 |
Fnu4HI
| GC|NGC |
20 |
HincII
| GTPy|PuAC |
442, 481 |
HinfI
| G|ANTC |
710 |
HpaI
| GTT|AAC |
442 |
HpaII
| C|CGG |
127, 392 |
Hpy188I
| TCN|GA |
201, 281, 320 |
Hpy99I
| CG[AT]CG| |
658 |
HpyCH4III
| ACN|GT |
65, 338, 438, 729 |
HpyCH4IV
| A|CGT |
294, 483, 693 |
HpyCH4V
| TG|CA |
68, 131, 452 |
MboI
| |GATC |
212, 429, 698 |
MseI
| T|TAA |
72, 149, 257, 441, 486, 507 |
MslI
| CAPyNN|NNPuTG |
464 |
MspI
| C|CGG |
127, 392 |
N.BstNBI
| GAGTCNNNN|N |
715 |
NlaIII
| CATG| |
332, 495 |
NlaIV
| GGN|NCC |
98, 648 |
PflMI
| CCANNNN|NTGG |
501 |
PsiI
| TTA|TAA |
414 |
PspGI
| |CC[AT]GG |
276 |
RsrII
| CG|G[AT]CCG |
284 |
Sau3AI
| |GATC |
212, 429, 698 |
Sau96I
| G|GNCC |
283 |
ScrFI
| CC|NGG |
276 |
SexAI
| A|CC[AT]GGT |
277 |
SmlI
| C|TPyPuAG |
60 |
SpeI
| A|CTAGT |
570 |
StyI
| C|C[AT][AT]GG |
501, 683 |
Taq��I
| T|CGA |
210, 421, 427, 717 |
TseI
| G|C[AT]GC |
20 |
Tsp45I
| |GT[CG]AC |
526 |
Tsp509I
| |AATT |
259, 302, 578, 612, 735 |
TspRI
| NNCA[CG]TGNN| |
68 |
Click here to view TAIR data
>AT1G56650.1 length:747
ATGGAGGGTT CGTCCAAAGG GCTGCGAAAA GGTGCTTGGA CTACTGAAGA | 50 |
AGATAGTCTC TTGAGACAGT GCATTAATAA GTATGGAGAA GGCAAATGGC | 100 |
ACCAAGTTCC TGTAAGAGCT GGGCTAAACC GGTGCAGGAA AAGTTGTAGA | 150 |
TTAAGATGGT TGAACTATTT GAAGCCAAGT ATCAAGAGAG GAAAACTTAG | 200 |
CTCTGATGAA GTCGATCTTC TTCTTCGCCT TCATAGGCTT CTAGGGAATA | 250 |
GGTGGTCTTT AATTGCTGGA AGATTACCTG GTCGGACCGC AAATGACGTC | 300 |
AAGAATTACT GGAACACTCA TCTGAGTAAG AAACATGAAC CGTGTTGTAA | 350 |
GATAAAGATG AAAAAGAGAG ACATTACGCC CATTCCTACA ACACCGGCAC | 400 |
TAAAAAACAA TGTTTATAAG CCTCGACCTC GATCCTTCAC AGTTAACAAC | 450 |
GACTGCAACC ATCTCAATGC CCCACCAAAA GTTGACGTTA ATCCTCCATG | 500 |
CCTTGGACTT AACATCAATA ATGTTTGTGA CAATAGTATC ATATACAACA | 550 |
AAGATAAGAA GAAAGACCAA CTAGTGAATA ATTTGATTGA TGGAGATAAT | 600 |
ATGTGGTTAG AGAAATTCCT AGAGGAAAGC CAAGAGGTAG ATATTTTGGT | 650 |
TCCTGAAGCG ACGACAACAG AAAAGGGGGA CACCTTGGCT TTTGACGTTG | 700 |
ATCAACTTTG GAGTCTTTTC GATGGAGAGA CTGTGAAATT TGATTAG | 750 |
>AT1G56650.1 longest ORF length:248
MEGSSKGLRK GAWTTEEDSL LRQCINKYGE GKWHQVPVRA GLNRCRKSCR | 50 |
LRWLNYLKPS IKRGKLSSDE VDLLLRLHRL LGNRWSLIAG RLPGRTANDV | 100 |
KNYWNTHLSK KHEPCCKIKM KKRDITPIPT TPALKNNVYK PRPRSFTVNN | 150 |
DCNHLNAPPK VDVNPPCLGL NINNVCDNSI IYNKDKKKDQ LVNNLIDGDN | 200 |
MWLEKFLEES QEVDILVPEA TTTEKGDTLA FDVDQLWSLF DGETVKFD | 250 |
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