fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68640 PAN PERIANTHIA, bZIP transcription factor family protein (.1)

>AT1G68640.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 984
EcoRI G|AATTC 774, 1253
NdeI CA|TATG 560, 883, 1159
SacI GAGCT|C 613, 623
SalI G|TCGAC 506
SpeI A|CTAGT 276
XhoI C|TCGAG 1093


Click here to view TAIR data

>AT1G68640.1 length:1359
ATGCAGAGCA GCTTCAAAAC CGTTCCTTTC ACTCCTGATT TCTACTCTCA 
50
GTCTTCTTAC TTCTTCAGAG GAGATAGTTG TCTTGAGGAG TTTCATCAAC 
100
CAGTCAATGG TTTTCACCAT GAAGAAGCTA TCGATTTAAG TCCAAATGTC 
150
ACTATTGCTT CAGCTAACTT ACACTACACG ACGTTTGATA CGGTTATGGA 
200
TTGTGGTGGT GGTGGTGGTG GTGGCTTGAG GGAGAGACTT GAAGGAGGAG 
250
AAGAGGAGTG TTTGGACACA GGGCAACTAG TGTACCAGAA AGGGACAAGA 
300
TTAGTAGGAG GAGGAGTAGG AGAAGTGAAC AGCAGTTGGT GTGATTCGGT 
350
TTCAGCTATG GCTGATAACA GTCAACATAC TGACACTTCC ACAGATATTG 
400
ATACTGATGA CAAGACTCAG TTGAATGGAG GTCATCAAGG GATGCTATTG 
450
GCTACAAATT GTTCAGATCA ATCCAATGTG AAATCTAGTG ATCAAAGGAC 
500
ACTTCGTCGA CTTGCTCAGA ACCGGGAGGC TGCTAGGAAA AGTCGGTTGA 
550
GGAAAAAGGC ATATGTTCAG CAACTTGAGA ATAGTCGAAT CAGGCTTGCA 
600
CAGCTAGAGG AAGAGCTCAA AAGAGCTCGC CAACAGGGAT CTTTGGTTGA 
650
AAGAGGAGTT TCAGCGGATC ACACGCATTT GGCAGCCGGA AATGGTGTCT 
700
TTTCATTTGA ATTGGAATAT ACACGTTGGA AGGAAGAACA TCAAAGAATG 
750
ATCAACGACT TAAGATCGGG TGTGAATTCG CAGTTAGGTG ACAACGATCT 
800
ACGCGTTCTA GTGGATGCTG TGATGAGTCA CTATGATGAA ATATTCAGGC 
850
TAAAGGGAAT TGGTACTAAA GTTGACGTCT TTCATATGCT CTCAGGCATG 
900
TGGAAGACAC CTGCCGAGAG ATTTTTCATG TGGTTAGGTG GATTTAGATC 
950
ATCAGAGTTA CTTAAGATAT TGGGGAACCA TGTGGATCCA TTGACGGACC 
1000
AGCAGTTGAT AGGCATTTGC AACCTTCAGC AATCGTCTCA ACAAGCAGAG 
1050
GATGCATTGT CACAAGGCAT GGAAGCTCTA CAACAATCAC TTCTCGAGAC 
1100
GCTTTCTTCT GCTTCAATGG GTCCAAACTC TTCAGCAAAT GTTGCAGATT 
1150
ATATGGGTCA TATGGCTATG GCTATGGGCA AACTTGGCAC TCTTGAAAAC 
1200
TTCCTTCGCC AGGCTGATTT ATTGAGGCAA CAAACTCTGC AACAGCTTCA 
1250
CAGAATTCTC ACCACACGAC AAGCTGCTCG CGCCTTTTTG GTCATCCACG 
1300
ATTATATTTC TCGGCTTAGA GCACTTAGCT CTCTATGGTT AGCCAGACCT 
1350
AGAGACTAA
1400

>AT1G68640.1 longest ORF length:452
MQSSFKTVPF TPDFYSQSSY FFRGDSCLEE FHQPVNGFHH EEAIDLSPNV 
50
TIASANLHYT TFDTVMDCGG GGGGGLRERL EGGEEECLDT GQLVYQKGTR 
100
LVGGGVGEVN SSWCDSVSAM ADNSQHTDTS TDIDTDDKTQ LNGGHQGMLL 
150
ATNCSDQSNV KSSDQRTLRR LAQNREAARK SRLRKKAYVQ QLENSRIRLA 
200
QLEEELKRAR QQGSLVERGV SADHTHLAAG NGVFSFELEY TRWKEEHQRM 
250
INDLRSGVNS QLGDNDLRVL VDAVMSHYDE IFRLKGIGTK VDVFHMLSGM 
300
WKTPAERFFM WLGGFRSSEL LKILGNHVDP LTDQQLIGIC NLQQSSQQAE 
350
DALSQGMEAL QQSLLETLSS ASMGPNSSAN VADYMGHMAM AMGKLGTLEN 
400
FLRQADLLRQ QTLQQLHRIL TTRQAARAFL VIHDYISRLR ALSSLWLARP 
450
RD
500