fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G68640 (PAN)

Alias PAN
TF Classification
FioreDBbZIP (Click to show phylogenetic tree)
RARTFbZIP / PERIANTHIA
AtTFDBbZIP
PlnTFDBbZIP (v3.0), bZIP (v1.0)
DATFbZIP
TAIR short description PERIANTHIA, bZIP transcription factor family protein (.1)
TAIR annotation Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants. (.1)
Gene model
Gene model cDNA support
AT1G68640.1 11
Entry clone (w/o stop) IE_05C02
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9909: developmental processes ->regulation of flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 4 5
soybean 1 12 13
rice 2 2 4
sorghum 2 1 3
physcomitrella
Total 2 4 19 25
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        More than 5 sepals and petals, stamen becomes to another flower occasionally.

         abnormal flower (direct input), 
         abnormal petal (direct input)


        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         rough surface leaf, 
         abnormal shaped leaf 
         (A20289-158)
         

         
         

         dwarf 
         (A20684-47)
         

         dwarf, 
         variegated leaf 
         (A20289-162)
         

         
         
         

         abnormal shaped silique 
         (A20286-50)
         

         
         

         loss of apical dominance, 
         short pedicel, 
         short internode 
         (A20286-45)
         

         
         

         late flowering 
         (A20503-76)
         

         narrow leaf, 
         abnormal shaped leaf 
         (A20684-40)
         

         abnormal shaped silique 
         (A20287-78)
         

         
         
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID35
           Chrysanthemum
           35S:AtCDS-SRDX
           2005-08-18
            
           no phenotype 
            
          

          

           ID56
           Gentiana
           AtACT2pro:AtCDS-SRDX
           2005-08-31
            
           No phenotype 
            
          

          

           ID92
           Cyclamen
           35S:AtCDS-SRDX
           2006-04-26
           now on progress 
            
            
          

          

           ID50139
           Eustoma
           35S:AtCDS-SRDX
           2010-11-11
            
           serrated petal, twisted stigma 
           
          

         

         

          Comment