| Locus |
Common name |
Short description |
| AT1G70920 |
ATHB18 |
homeobox-leucine zipper protein 18 (.1) |
>AT1G70920.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AflII, AgeI, AhdI, AlwI, AlwNI, ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, N.BstNBI, , NarI, NciI, NcoI, NdeI, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AfeI
| AGC|GCT |
465 |
| AflIII
| A|CPuPyGT |
162, 516 |
| AluI
| AG|CT |
20, 50, 207, 309, 352, 363 |
| Aor51HI(Eco47III)
| AGC|GCT |
465 |
| AvaI
| C|PyCGPuG |
186 |
| BalI
| TGG|CCA |
296 |
| BanII
| GPuGCPy|C |
353 |
| BclI
| T|GATCA |
78 |
| BsaJI
| C|CNNGG |
485, 505 |
| BsiHKAI
| G[AT]GC[AT]|C |
353 |
| BslI
| CCNNNNN|NNGG |
72 |
| BsoBI
| C|PyCGPuG |
186 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
353 |
| BsrFI
| Pu|CCGGPy |
194, 578 |
| BstF5I
| GGATGNN| |
90, 144, 588 |
| Cac8I
| GCN|NGC |
194 |
| Cfr10I
| [AG]|CCGG[TC] |
194, 578 |
| DdeI
| C|TNAG |
277, 312, 570 |
| DpnI
| GA-CH3|TC |
77, 131, 145, 411 |
| DpnII
| |GATC |
77, 131, 145, 411 |
| DraIII
| CACNNN|GTG |
74 |
| EaeI
| Py|GGCCPu |
192, 296 |
| Fnu4HI
| GC|NGC |
197, 574 |
| HaeII
| PuGCGC|Py |
465 |
| HaeIII
| GG|CC |
1, 191, 295 |
| HhaI
| GCG|C |
199, 464 |
| HinP1I
| G|CGC |
199, 464 |
| HincII
| GTPy|PuAC |
166 |
| HindIII
| A|AGCTT |
310 |
| HinfI
| G|ANTC |
540 |
| HpaII
| C|CGG |
193, 577 |
| Hpy188I
| TCN|GA |
47, 356, 409 |
| Hpy99I
| CG[AT]CG| |
432 |
| HpyCH4IV
| A|CGT |
514 |
| HpyCH4V
| TG|CA |
151, 526 |
| MboI
| |GATC |
77, 131, 145, 411 |
| MscI
| TGG|CCA |
296 |
| MseI
| T|TAA |
32, 269, 491 |
| MslI
| CAPyNN|NNPuTG |
379 |
| MspI
| C|CGG |
193, 577 |
| MwoI
| GCNNNNN|NNGC |
199 |
| NaeI
| GCC|GGC |
194 |
| NgoMIV
| G|CCGGC |
194 |
| NlaIII
| CATG| |
161, 496 |
| NspI
| PuCATG|Py |
162 |
| PciI
| A|CATGT |
162 |
| SacI
| GAGCT|C |
353 |
| Sau3AI
| |GATC |
77, 131, 145, 411 |
| Sau96I
| G|GNCC |
2 |
| Taqƒ¿I
| T|CGA |
346, 430, 479 |
| TseI
| G|C[AT]GC |
574 |
| Tsp45I
| |GT[CG]AC |
519, 581 |
| Tsp509I
| |AATT |
14, 43, 592 |
Click here to view TAIR data
>AT1G70920.1 length:621
ATGGCCCTCT CACCTAATTC AAGCTCTTTA GATTTAACAA TCTCAATTCC | 50 |
GAGCTTCTCT CCATCTCCTT CACTTGGTGA TCATCACGGG ATGAGAGATT | 100 |
TTGACATAAA CCAAACACCA AAGACGGAAG AAGATCGTGA GTGGATGATC | 150 |
GGTGCAACAC CACATGTCAA CGAAGATGAT AGCAACTCGG GTGGCCGGCG | 200 |
GCGCAAAAAG CTCCGTCTAA CGAAAGAACA ATCACATCTT CTTGAAGAGA | 250 |
GTTTCATACA AAACCATACC TTAACCCCTA AGCAAAAAAA AGATTTGGCC | 300 |
ACCTTTTTGA AGCTTAGTCA AAGGCAAGTT GAGGTGTGGT TTCAAAATCG | 350 |
AAGAGCTCGG AGTAAGCTAA AGCACACGGA AATGGAATGT GAGTATCTAA | 400 |
AAAGATGGTT CGGATCGTTG AAGGAACAAA ATCGACGGCT ACAAATAGAA | 450 |
GTTGAAGAAC TACGAGCGCT AAAGCCATCA TCGACCTCGG CTTTAACCAT | 500 |
GTGTCCTCGG TGTGAACGTG TGACTGATGC AGTAGATAAT GACTCTAATG | 550 |
CCGTTCAAGA GGGGGCAGTT CTTAGCAGCC GGTCACGGAT GACAATTTCC | 600 |
TCTTCCTCTT CCCTCTGTTG A | 650 |
>AT1G70920.1 longest ORF length:206
MALSPNSSSL DLTISIPSFS PSPSLGDHHG MRDFDINQTP KTEEDREWMI | 50 |
GATPHVNEDD SNSGGRRRKK LRLTKEQSHL LEESFIQNHT LTPKQKKDLA | 100 |
TFLKLSQRQV EVWFQNRRAR SKLKHTEMEC EYLKRWFGSL KEQNRRLQIE | 150 |
VEELRALKPS STSALTMCPR CERVTDAVDN DSNAVQEGAV LSSRSRMTIS | 200 |
SSSSLC | 250 |
|