fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75390 ATBZIP44 basic leucine-zipper 44 (.1.2)

>AT1G75390.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrDI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AgeI A|CCGGT 400
AluI AG|CT 67, 307
AlwNI CAGNNN|CTG 86
BanII GPuGCPy|C 308
BfaI C|TAG 455
BsaAI PyAC|GTPu 221
BsaWI [AT]|CCGG[AT] 76, 400
BsiHKAI G[AT]GC[AT]|C 308
Bsp1286I G[GAT]GC[CAT]|C 308
BsrBI GAG|CGG 118
BsrFI Pu|CCGGPy 400
BsrI ACTGGN| 61
BstF5I GGATGNN| 171, 193
BstYI Pu|GATCPy 22
Cfr10I [AG]|CCGG[TC] 400
DdeI C|TNAG 205, 235, 303, 310
DpnI GA-CH3|TC 21, 89, 104, 194, 238, 352
DpnII |GATC 21, 89, 104, 194, 238, 352
Fnu4HI GC|NGC 266
HinfI G|ANTC 84, 150, 212, 250, 369, 385, 443, 452
HpaII C|CGG 75, 94, 246, 399
Hpy188I TCN|GA 81, 87, 236, 304
Hpy99I CG[AT]CG| 46, 113, 242, 262, 365, 416, 431
HpyCH4III ACN|GT 137, 331, 418, 514
HpyCH4IV A|CGT 100, 220, 273
MboI |GATC 21, 89, 104, 194, 238, 352
MseI T|TAA 324, 345
MslI CAPyNN|NNPuTG 191
MspI C|CGG 75, 94, 246, 399
MwoI GCNNNNN|NNGC 252, 495
NlaIII CATG| 478
PsiI TTA|TAA 465
SacI GAGCT|C 308
Sau3AI |GATC 21, 89, 104, 194, 238, 352
SnaBI TAC|GTA 221
Taqƒ¿I T|CGA 111, 140, 164, 282, 366, 414, 429
TfiI G|A[AT]TC 84, 150, 250, 369, 385, 443, 452
TseI G|C[AT]GC 266
Tsp45I |GT[CG]AC 210, 258, 276
Tsp509I |AATT 38
TspRI NNCA[CG]TGNN| 61, 202


Click here to view TAIR data

>AT1G75390.1 length:522
ATGAATAATA AAACTGAAAT GGGATCTTCC ACAAGTGGAA ATTGCTCGTC 
50
GGTTTCAACC ACTGGTTTAG CTAACTCCGG TTCAGAATCT GATCTCCGGC 
100
AACGTGATCT AATCGACGAG CGGAAGAGAA AGAGGAAACA GTCGAACAGA 
150
GAATCTGCGA GGAGGTCGAG GATGAGGAAG CAGAAGCATT TGGATGATCT 
200
CACTGCTCAG GTGACTCATC TACGTAAAGA AAACGCTCAG ATCGTCGCCG 
250
GAATCGCCGT CACGACGCAG CACTACGTCA CTATCGAGGC GGAGAACGAC 
300
ATTCTCAGAG CTCAGGTTCT TGAACTTAAC CACCGTCTCC AATCTCTTAA 
350
CGAGATCGTT GATTTCGTCG AATCTTCTTC TTCAGGATTC GGTATGGAGA 
400
CCGGTCAGGG ATTATTCGAC GGTGGATTAT TCGACGGCGT GATGAATCCT 
450
ATGAATCTAG GGTTTTATAA TCAACCAATC ATGGCTTCTG CTTCTACTGC 
500
TGGTGATGTT TTCAACTGTT AG
550

>AT1G75390.1 longest ORF length:173
MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR 
50
ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND 
100
ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP 
150
MNLGFYNQPI MASASTAGDV FNC
200