Locus |
Common name |
Short description |
AT2G01500 |
WOX6, PFS2, HOS9 |
WUSCHEL RELATED HOMEOBOX 6, PRETTY FEW SEEDS 2, HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 9, Homeodomain-like superfamily protein (.1) |
>AT2G01500.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SspI, StuI, StyI, SwaI, TliI, TseI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
403 |
AciI
| C|CGC |
114, 361 |
AclI
| AA|CGTT |
313 |
AluI
| AG|CT |
105, 219, 279, 447 |
AseI
| AT|TAAT |
649 |
BclI
| T|GATCA |
96, 438, 567 |
BfaI
| C|TAG |
212, 342 |
BsaBI
| GATNN|NNATC |
101, 652 |
BsaHI
| GPu|CGPyC |
192, 243, 403 |
BsaWI
| [AT]|CCGG[AT] |
639, 698, 717 |
BsrDI
| GCAATGNN| |
94 |
BsrFI
| Pu|CCGGPy |
746 |
BstYI
| Pu|GATCPy |
260, 501 |
Cac8I
| GCN|NGC |
769 |
Cfr10I
| [AG]|CCGG[TC] |
746 |
DdeI
| C|TNAG |
277 |
DpnI
| GA-CH3|TC |
95, 202, 259, 437, 500, 542, 566 |
DpnII
| |GATC |
95, 202, 259, 437, 500, 542, 566 |
DraI
| TTT|AAA |
705 |
DrdI
| GACNNNN|NNGTC |
664 |
Fnu4HI
| GC|NGC |
165, 361 |
HaeIII
| GG|CC |
743 |
HincII
| GTPy|PuAC |
667 |
HindIII
| A|AGCTT |
280 |
HinfI
| G|ANTC |
185, 298, 332, 411, 561 |
HpaII
| C|CGG |
638, 697, 716, 745 |
Hpy188I
| TCN|GA |
188, 329, 440, 564, 569, 579, 803 |
Hpy99I
| CG[AT]CG| |
190, 208, 247, 366, 656 |
HpyCH4III
| ACN|GT |
76, 778 |
HpyCH4IV
| A|CGT |
312, 402 |
HpyCH4V
| TG|CA |
770 |
MboI
| |GATC |
95, 202, 259, 437, 500, 542, 566 |
MseI
| T|TAA |
84, 648, 704 |
MspI
| C|CGG |
638, 697, 716, 745 |
MwoI
| GCNNNNN|NNGC |
218 |
NlaIII
| CATG| |
491, 545, 600, 768, 796 |
NspI
| PuCATG|Py |
769 |
RsaI
| GT|AC |
727 |
Sau3AI
| |GATC |
95, 202, 259, 437, 500, 542, 566 |
SphI
| GCATG|C |
769 |
Taqƒ¿I
| T|CGA |
300, 430, 623, 654 |
TfiI
| G|A[AT]TC |
185, 298, 332, 411, 561 |
Tsp509I
| |AATT |
495 |
TspRI
| NNCA[CG]TGNN| |
77 |
XmnI
| GAANN|NNTTC |
316 |
Click here to view TAIR data
>AT2G01500.1 length:816
ATGGGCTACA TCTCCAACAA CAACCTCATC AACTATTTGC CCCTCTCTAC | 50 |
TACTCAACCT CCTCTTCTTC TCACCCACTG TGATATTAAC GGCAATGATC | 100 |
ACCATCAGCT CATAACCGCA TCATCAGGAG AACACGATAT TGATGAACGG | 150 |
AAAAACAACA TTCCTGCGGC GGCGACTTTG AGATGGAATC CGACGCCAGA | 200 |
GCAGATCACG ACGCTAGAAG AGCTTTACAG AAGCGGAACA CGGACGCCGA | 250 |
CGACGGAACA GATCCAACAG ATAGCATCTA AGCTTCGTAA ATATGGGAGA | 300 |
ATCGAAGGGA AGAACGTTTT CTATTGGTTT CAGAATCATA AGGCTAGAGA | 350 |
GAGACTAAAA CGCCGCCGTC GTGAAGGTGG TGCTATTATC AAACCACATA | 400 |
AAGACGTCAA GGATTCATCA TCAGGTGGTC ATCGAGTTGA TCAGACAAAG | 450 |
CTCTGCCCAT CTTTTCCACA CACAAACCGA CCACAGCCAC AGCATGAATT | 500 |
AGATCCTGCG AGTTACAATA AAGACAACAA TGCTAATAAT GAAGATCATG | 550 |
GGACGACTGA AGAATCTGAT CAGAGGGCAT CAGAGGTTGG TAAATACGCC | 600 |
ACATGGAGAA ATCTTGTTAC TTGGTCGATA ACTCAACAAC CGGAAGAGAT | 650 |
TAATATCGAC GAAAATGTCA ACGGAGAAGA AGAAGAAACG AGGGACAACC | 700 |
GGACTTTAAA TCTCTTTCCG GTTAGGGAGT ACCAAGAGAA AACAGGCCGG | 750 |
TTGATAGAGA AGACGAAAGC ATGCAACTAC TGTTACTACT ACGAGTTCAT | 800 |
GCCTCTGAAG AACTGA | 850 |
>AT2G01500.1 longest ORF length:271
MGYISNNNLI NYLPLSTTQP PLLLTHCDIN GNDHHQLITA SSGEHDIDER | 50 |
KNNIPAAATL RWNPTPEQIT TLEELYRSGT RTPTTEQIQQ IASKLRKYGR | 100 |
IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK | 150 |
LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA | 200 |
TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR | 250 |
LIEKTKACNY CYYYEFMPLK N | 300 |
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