Locus |
Common name |
Short description |
AT2G02540 |
ATHB21, ZFHD4, ZHD3 |
ZINC FINGER HOMEODOMAIN 3, ZINC FINGER HOMEODOMAIN 4, homeobox protein 21 (.1) |
>AT2G02540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
556 |
HindIII
| A|AGCTT |
603 |
NcoI
| C|CATGG |
290 |
SalI
| G|TCGAC |
874 |
SpeI
| A|CTAGT |
40, 141 |
StyI
| C|C[AT][AT]GG |
290 |
Click here to view TAIR data
>AT2G02540.1 length:933
ATGGAGATTG CAAGTCAAGA AGATCCTATT CCAATAAACA CTAGTTATGG | 50 |
TAATAGTGGA GGTGGGCATG GGAACATGAA CCATCATCAT CATGCCAATT | 100 |
CTGCACCATC ATCTCTCAAC ATTACTACTT CAAACCCACT ACTAGTCTCC | 150 |
TCAAATAGTA ATGGTCTTGG TAAAAATCAT GATCATTCTC ATCATCATCA | 200 |
TGTGGGTTAC AACATCATGG TTACCAACAT CAAGAAAGAG AAGCCTGTGG | 250 |
TGATAAAGTA CAAGGAATGC CTAAAGAACC ATGCAGCTAC CATGGGAGGC | 300 |
AATGCCATTG ATGGTTGTGG AGAGTTTATG CCAAGTGGTG AAGAAGGTTC | 350 |
CATTGAAGCT CTCACTTGCT CAGTTTGCAA CTGCCATAGA AACTTTCATA | 400 |
GAAGAGAAAC CGAAGGTGAA GAGAAAACAT TCTTTTCCCC TTACCTCAAC | 450 |
CACCACCAAC CACCTCCGCA GCAGAGAAAA CTCATGTTCC ACCACAAGAT | 500 |
GATCAAATCA CCATTACCAC AACAAATGAT AATGCCTATT GGCGTTACAA | 550 |
CCGCTGGATC CAACTCAGAG TCAGAGGATC TTATGGAGGA AGAAGGCGGA | 600 |
GGAAGCTTGA CATTCCGGCA GCCACCACCA CCACCATCAC CGTATAGTTA | 650 |
CGGACATAAT CAGAAGAAAA GGTTTAGGAC AAAGTTTACA CAAGAGCAAA | 700 |
AGGAGAAGAT GATTAGTTTT GCGGAAAGAG TTGGTTGGAA GATTCAGAGA | 750 |
CAAGAGGAAT CTGTTGTTCA ACAGCTTTGT CAAGAGATTG GAATTAGGAG | 800 |
AAGAGTTCTT AAAGTTTGGA TGCACAACAA CAAACAAAAT CTCTCCAAGA | 850 |
AGAGCAACAA CGTTAGTAAC AATGTCGACC TTTCTGCTGG TAATAACGAC | 900 |
ATTACTGAAA ATCTTGCTTC TACTAATCCT TAG | 950 |
>AT2G02540.1 longest ORF length:310
MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS | 50 |
SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG | 100 |
NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN | 150 |
HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG | 200 |
GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR | 250 |
QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND | 300 |
ITENLASTNP | 350 |
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