fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G02540 ATHB21, ZFHD4, ZHD3 ZINC FINGER HOMEODOMAIN 3, ZINC FINGER HOMEODOMAIN 4, homeobox protein 21 (.1)

>AT2G02540.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 556
HindIII A|AGCTT 603
NcoI C|CATGG 290
SalI G|TCGAC 874
SpeI A|CTAGT 40, 141
StyI C|C[AT][AT]GG 290


Click here to view TAIR data

>AT2G02540.1 length:933
ATGGAGATTG CAAGTCAAGA AGATCCTATT CCAATAAACA CTAGTTATGG 
50
TAATAGTGGA GGTGGGCATG GGAACATGAA CCATCATCAT CATGCCAATT 
100
CTGCACCATC ATCTCTCAAC ATTACTACTT CAAACCCACT ACTAGTCTCC 
150
TCAAATAGTA ATGGTCTTGG TAAAAATCAT GATCATTCTC ATCATCATCA 
200
TGTGGGTTAC AACATCATGG TTACCAACAT CAAGAAAGAG AAGCCTGTGG 
250
TGATAAAGTA CAAGGAATGC CTAAAGAACC ATGCAGCTAC CATGGGAGGC 
300
AATGCCATTG ATGGTTGTGG AGAGTTTATG CCAAGTGGTG AAGAAGGTTC 
350
CATTGAAGCT CTCACTTGCT CAGTTTGCAA CTGCCATAGA AACTTTCATA 
400
GAAGAGAAAC CGAAGGTGAA GAGAAAACAT TCTTTTCCCC TTACCTCAAC 
450
CACCACCAAC CACCTCCGCA GCAGAGAAAA CTCATGTTCC ACCACAAGAT 
500
GATCAAATCA CCATTACCAC AACAAATGAT AATGCCTATT GGCGTTACAA 
550
CCGCTGGATC CAACTCAGAG TCAGAGGATC TTATGGAGGA AGAAGGCGGA 
600
GGAAGCTTGA CATTCCGGCA GCCACCACCA CCACCATCAC CGTATAGTTA 
650
CGGACATAAT CAGAAGAAAA GGTTTAGGAC AAAGTTTACA CAAGAGCAAA 
700
AGGAGAAGAT GATTAGTTTT GCGGAAAGAG TTGGTTGGAA GATTCAGAGA 
750
CAAGAGGAAT CTGTTGTTCA ACAGCTTTGT CAAGAGATTG GAATTAGGAG 
800
AAGAGTTCTT AAAGTTTGGA TGCACAACAA CAAACAAAAT CTCTCCAAGA 
850
AGAGCAACAA CGTTAGTAAC AATGTCGACC TTTCTGCTGG TAATAACGAC 
900
ATTACTGAAA ATCTTGCTTC TACTAATCCT TAG
950

>AT2G02540.1 longest ORF length:310
MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS 
50
SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG 
100
NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN 
150
HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG 
200
GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR 
250
QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND 
300
ITENLASTNP 
350