Locus |
Common name |
Short description |
AT2G03710 |
AGL3, SEP4 |
SEPALLATA 4, AGAMOUS-like 3, K-box region and MADS-box transcription factor family protein (.1.2.3) |
>AT2G03710.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
237 |
BglII
| A|GATCT |
418, 498 |
EcoRI
| G|AATTC |
166 |
HindIII
| A|AGCTT |
289 |
PstI
| CTGCA|G |
171, 563 |
SacI
| GAGCT|C |
606 |
StyI
| C|C[AT][AT]GG |
425 |
Click here to view TAIR data
>AT2G03710.1 length:777
ATGGGAAGAG GGAAAGTTGA GCTGAAGAGG ATAGAGAACA AGATCAATAG | 50 |
ACAAGTTACT TTTGCAAAGA GAAGAAATGG TTTGCTCAAG AAGGCTTATG | 100 |
AGCTTTCTGT CCTTTGTGAT GCTGAGATTG CTCTTCTCAT TTTCTCTAAC | 150 |
CGTGGCAAGC TCTACGAATT CTGCAGCAGC CCTAGTGGTA TGGCGAGGAC | 200 |
GGTTGATAAG TATAGAAAAC ATAGTTATGC AACAATGGAT CCAAATCAAT | 250 |
CAGCTAAAGA CTTGCAGGAT AAGTATCAAG ACTACTTGAA GCTTAAATCA | 300 |
AGAGTTGAGA TCCTTCAACA TTCACAAAGG CATTTGCTAG GTGAAGAGCT | 350 |
ATCCGAGATG GATGTGAATG AGCTTGAGCA TCTCGAACGC CAAGTAGATG | 400 |
CATCACTAAG ACAAATAAGA TCTACCAAGG CTCGGTCTAT GCTTGATCAA | 450 |
CTATCTGACC TCAAAACTAA GGAGGAAATG TTATTGGAAA CCAATAGAGA | 500 |
TCTTAGGAGA AAGTTGGAGG ACAGTGATGC AGCACTTACT CAATCGTTTT | 550 |
GGGGAAGTTC TGCTGCAGAA CAACAACAAC AACATCAACA ACAGCAACAA | 600 |
GGCATGAGCT CTTATCAATC AAACCCTCCA ATTCAGGAAG CAGGTTTCTT | 650 |
CAAGCCTCTA CAAGGCAATG TAGCATTGCA AATGAGCAGT CATTACAATC | 700 |
ACAATCCTGC AAATGCAACC AACTCTGCAA CAACATCACA GAATGTTAAT | 750 |
GGATTCTTCC CTGGATGGAT GGTCTGA | 800 |
>AT2G03710.1 longest ORF length:258
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN | 50 |
RGKLYEFCSS PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS | 100 |
RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ | 150 |
LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ | 200 |
GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN | 250 |
GFFPGWMV | 300 |
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