fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G03710 AGL3, SEP4 SEPALLATA 4, AGAMOUS-like 3, K-box region and MADS-box transcription factor family protein (.1.2.3)

>AT2G03710.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 237
BglII A|GATCT 418, 498
EcoRI G|AATTC 166
HindIII A|AGCTT 289
PstI CTGCA|G 171, 563
SacI GAGCT|C 606
StyI C|C[AT][AT]GG 425


Click here to view TAIR data

>AT2G03710.2 length:774
ATGGGAAGAG GGAAAGTTGA GCTGAAGAGG ATAGAGAACA AGATCAATAG 
50
ACAAGTTACT TTTGCAAAGA GAAGAAATGG TTTGCTCAAG AAGGCTTATG 
100
AGCTTTCTGT CCTTTGTGAT GCTGAGATTG CTCTTCTCAT TTTCTCTAAC 
150
CGTGGCAAGC TCTACGAATT CTGCAGCAGC CCTAGTGGTA TGGCGAGGAC 
200
GGTTGATAAG TATAGAAAAC ATAGTTATGC AACAATGGAT CCAAATCAAT 
250
CAGCTAAAGA CTTGCAGGAT AAGTATCAAG ACTACTTGAA GCTTAAATCA 
300
AGAGTTGAGA TCCTTCAACA TTCACAAAGG CATTTGCTAG GTGAAGAGCT 
350
ATCCGAGATG GATGTGAATG AGCTTGAGCA TCTCGAACGC CAAGTAGATG 
400
CATCACTAAG ACAAATAAGA TCTACCAAGG CTCGGTCTAT GCTTGATCAA 
450
CTATCTGACC TCAAAACTAA GGAGGAAATG TTATTGGAAA CCAATAGAGA 
500
TCTTAGGAGA AAGTTGGAGG ACAGTGATGC AGCACTTACT CAATCGTTTT 
550
GGGGAAGTTC TGCTGCAGAA CAACAACAAC AACATCAACA ACAGCAACAA 
600
GGCATGAGCT CTTATCAATC AAACCCTCCA ATTCAGGAAG CAGGTTTCTT 
650
CAAGCCTCTA CAAGGCAATG TAGCATTGCA AATGAGTCAT TACAATCACA 
700
ATCCTGCAAA TGCAACCAAC TCTGCAACAA CATCACAGAA TGTTAATGGA 
750
TTCTTCCCTG GATGGATGGT CTGA
800

>AT2G03710.2 longest ORF length:257
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN 
50
RGKLYEFCSS PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS 
100
RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ 
150
LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ 
200
GMSSYQSNPP IQEAGFFKPL QGNVALQMSH YNHNPANATN SATTSQNVNG 
250
FFPGWMV
300