Locus |
Common name |
Short description |
AT2G17950 |
WUS1, PGA6, WUS |
WUSCHEL 1, WUSCHEL, Homeodomain-like superfamily protein (.1) |
>AT2G17950.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BstAPI, BstBI, BstNI, BstUI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, TliI, TseI, Tth111I, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
5 |
AclI
| AA|CGTT |
430 |
AflIII
| A|CPuPyGT |
89 |
AluI
| AG|CT |
482, 512, 861 |
AlwNI
| CAGNNN|CTG |
521 |
ApoI
| Pu|AATTPy |
498 |
BalI
| TGG|CCA |
828 |
BanI
| G|GPyPuCC |
811 |
BfaI
| C|TAG |
698, 874 |
BsaAI
| PyAC|GTPu |
90 |
BsaBI
| GATNN|NNATC |
368, 740 |
BsaWI
| [AT]|CCGG[AT] |
173 |
BsiWI
| C|GTACG |
757 |
BslI
| CCNNNNN|NNGG |
109, 693, 780 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
811 |
BsrI
| ACTGGN| |
257 |
BssSI
| C|TCGTG |
278 |
BstEII
| G|GTNACC |
177 |
BstF5I
| GGATGNN| |
626 |
BstXI
| CCANNNNN|NTGG |
573 |
BstYI
| Pu|GATCPy |
194, 577 |
Cac8I
| GCN|NGC |
511 |
DdeI
| C|TNAG |
216, 515 |
DpnI
| GA-CH3|TC |
188, 193, 202, 362, 576, 638, 788 |
DpnII
| |GATC |
188, 193, 202, 362, 576, 638, 788 |
DraI
| TTT|AAA |
501 |
DraIII
| CACNNN|GTG |
111 |
EaeI
| Py|GGCCPu |
828 |
Fnu4HI
| GC|NGC |
5, 49, 354 |
HaeIII
| GG|CC |
827 |
HhaI
| GCG|C |
849 |
HinP1I
| G|CGC |
849 |
HincII
| GTPy|PuAC |
427 |
HinfI
| G|ANTC |
298 |
HpaII
| C|CGG |
72, 172 |
Hpy188I
| TCN|GA |
191, 226, 287, 834, 869 |
Hpy99I
| CG[AT]CG| |
121, 753 |
HpyCH4III
| ACN|GT |
221, 394, 592, 781, 799 |
HpyCH4IV
| A|CGT |
89, 246, 429, 612, 754, 865 |
HpyCH4V
| TG|CA |
166, 208, 405, 508, 655, 777 |
MboI
| |GATC |
188, 193, 202, 362, 576, 638, 788 |
MscI
| TGG|CCA |
828 |
MseI
| T|TAA |
432, 438, 500, 537 |
MslI
| CAPyNN|NNPuTG |
395, 572 |
MspI
| C|CGG |
72, 172 |
MwoI
| GCNNNNN|NNGC |
11, 103 |
NlaIII
| CATG| |
313, 403, 506, 556, 566, 634 |
NlaIV
| GGN|NCC |
3, 260, 811 |
PmlI
| CAC|GTG |
90 |
RsaI
| GT|AC |
519, 756 |
Sau3AI
| |GATC |
188, 193, 202, 362, 576, 638, 788 |
SmlI
| C|TPyPuAG |
859 |
SwaI
| ATTT|AAAT |
502 |
Taqƒ¿I
| T|CGA |
672, 751 |
TfiI
| G|A[AT]TC |
298 |
Tsp45I
| |GT[CG]AC |
176 |
Tsp509I
| |AATT |
419, 497, 602 |
TspRI
| NNCA[CG]TGNN| |
208 |
XbaI
| T|CTAGA |
699 |
XmnI
| GAANN|NNTTC |
298 |
Click here to view TAIR data
>AT2G17950.1 length:879
ATGGAGCCGC CACAGCATCA GCATCATCAT CATCAAGCCG ACCAAGAAAG | 50 |
CGGCAACAAC AACAACAACA AGTCCGGCTC TGGTGGTTAC ACGTGTCGCC | 100 |
AGACCAGCAC GAGGTGGACA CCGACGACGG AGCAAATCAA AATCCTCAAA | 150 |
GAACTTTACT ACAACAATGC AATCCGGTCA CCAACAGCCG ATCAGATCCA | 200 |
GAAGATCACT GCAAGGCTGA GACAGTTCGG AAAGATTGAG GGCAAGAACG | 250 |
TCTTTTACTG GTTCCAGAAC CATAAGGCTC GTGAGCGTCA GAAGAAGAGA | 300 |
TTCAACGGAA CAAACATGAC CACACCATCT TCATCACCCA ACTCGGTTAT | 350 |
GATGGCGGCT AACGATCATT ATCATCCTCT ACTTCACCAT CATCACGGTG | 400 |
TTCCCATGCA GAGACCTGCT AATTCCGTCA ACGTTAAACT TAACCAAGAC | 450 |
CATCATCTCT ATCATCATAA CAAGCCATAT CCCAGCTTCA ATAACGGGAA | 500 |
TTTAAATCAT GCAAGCTCAG GTACTGAATG TGGTGTTGTT AATGCTTCTA | 550 |
ATGGCTACAT GAGTAGCCAT GTCTATGGAT CTATGGAACA AGACTGTTCT | 600 |
ATGAATTACA ACAACGTAGG TGGAGGATGG GCAAACATGG ATCATCATTA | 650 |
CTCATCTGCA CCTTACAACT TCTTCGATAG AGCAAAGCCT CTGTTTGGTC | 700 |
TAGAAGGTCA TCAAGAAGAA GAAGAATGTG GTGGCGATGC TTATCTGGAA | 750 |
CATCGACGTA CGCTTCCTCT CTTCCCTATG CACGGTGAAG ATCACATCAA | 800 |
CGGTGGTAGT GGTGCCATCT GGAAGTATGG CCAATCGGAA GTTCGCCCTT | 850 |
GCGCTTCTCT TGAGCTACGT CTGAACTAG | 900 |
>AT2G17950.1 longest ORF length:292
MEPPQHQHHH HQADQESGNN NNNKSGSGGY TCRQTSTRWT PTTEQIKILK | 50 |
ELYYNNAIRS PTADQIQKIT ARLRQFGKIE GKNVFYWFQN HKARERQKKR | 100 |
FNGTNMTTPS SSPNSVMMAA NDHYHPLLHH HHGVPMQRPA NSVNVKLNQD | 150 |
HHLYHHNKPY PSFNNGNLNH ASSGTECGVV NASNGYMSSH VYGSMEQDCS | 200 |
MNYNNVGGGW ANMDHHYSSA PYNFFDRAKP LFGLEGHQEE EECGGDAYLE | 250 |
HRRTLPLFPM HGEDHINGGS GAIWKYGQSE VRPCASLELR LN | 300 |
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