Locus |
Common name |
Short description |
AT2G21650 |
RSM1, ATRL2, MEE3 |
RADIALIS-LIKE SANT/MYB 1, MATERNAL EFFECT EMBRYO ARREST 3, ARABIDOPSIS RAD-LIKE 2, Homeodomain-like superfamily protein (.1) |
>AT2G21650.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DpnI, DpnII, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HinfI, HpaI, HphI, Hpy188I, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsaI, SacI, SacII, SalI, SapI, Sau3AI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TliI, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccIII(BspMII)
| T|CCGGA |
99 |
AluI
| AG|CT |
124, 151, 294 |
AvaII
| G|G[AT]CC |
101 |
BfaI
| C|TAG |
74, 120, 173 |
BsaAI
| PyAC|GTPu |
208 |
BsaWI
| [AT]|CCGG[AT] |
99 |
BsiHKAI
| G[AT]GC[AT]|C |
71 |
Bsp1286I
| G[GAT]GC[CAT]|C |
71 |
BspEI
| T|CCGGA |
99 |
BstF5I
| GGATGNN| |
282 |
Cac8I
| GCN|NGC |
69, 257 |
DdeI
| C|TNAG |
154 |
Fnu4HI
| GC|NGC |
260, 296 |
HpaII
| C|CGG |
98 |
HpyCH4III
| ACN|GT |
42, 103, 161 |
HpyCH4IV
| A|CGT |
207 |
HpyCH4V
| TG|CA |
297 |
MseI
| T|TAA |
45 |
MspI
| C|CGG |
98 |
MwoI
| GCNNNNN|NNGC |
253 |
NlaIII
| CATG| |
36, 289 |
PmlI
| CAC|GTG |
208 |
PstI
| CTGCA|G |
298 |
RsrII
| CG|G[AT]CCG |
102 |
Sau96I
| G|GNCC |
101 |
SfcI
| C|TPuPyAG |
236, 298 |
Taqƒ¿I
| T|CGA |
186, 195 |
TseI
| G|C[AT]GC |
260, 296 |
Tsp45I
| |GT[CG]AC |
181, 205 |
Click here to view TAIR data
>AT2G21650.1 length:306
ATGGCATCAG GCTCAATGTC TTCTTATGGC TCTGGCTCAT GGACTGTTAA | 50 |
GCAGAACAAA GCCTTTGAGC GTGCTCTAGC AGTCTATGAC CAAGACACTC | 100 |
CGGACCGTTG GCACAATGTT GCTAGAGCTG TTGGTGGTAA AACACCAGAA | 150 |
GAAGCTAAGA GACAGTATGA CCTTCTAGTT CGTGACATCG AAAGCATCGA | 200 |
GAATGGTCAC GTGCCATTCC CTGACTACAA GACTACTACA GGAAACAGCA | 250 |
ACAGAGGCAG GCTGCGTGAT GAGGAAAAGA GGATGAGAAG CATGAAGCTG | 300 |
CAGTGA | 350 |
>AT2G21650.1 longest ORF length:101
MASGSMSSYG SGSWTVKQNK AFERALAVYD QDTPDRWHNV ARAVGGKTPE | 50 |
EAKRQYDLLV RDIESIENGH VPFPDYKTTT GNSNRGRLRD EEKRMRSMKL | 100 |
Q | 150 |
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