fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G21920 F-box associated ubiquitination effector family protein (.1)

>AT2G21920.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NheI, NotI, PacI, PvuII, SacI, SmaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 4362, 8619
BglII A|GATCT 2779, 7906, 8913
EcoRI G|AATTC 2637, 6735, 8394
EcoRV GAT|ATC 252, 2052, 3617, 7676
HindIII A|AGCTT 372, 3966, 4103, 4191, 4699, 5400, 7047, 9238
HpaI GTT|AAC 6231
NcoI C|CATGG 2021, 2400, 3876, 5473, 7450
NdeI CA|TATG 2518, 7282
PstI CTGCA|G 543
SalI G|TCGAC 585
SpeI A|CTAGT 3401
StyI C|C[AT][AT]GG 2021, 2400, 3876, 5110, 5473, 7450
XbaI T|CTAGA 4156, 5830, 5904, 6131, 8806


Click here to view TAIR data

>AT2G21920 genomic sequence (4001-4246,5017-5115,6280-6313,6856-6917,7355-7750,) length:9249
TCTACAATCA ACCCATGATG GGTACTGAAT CCTCTGAGTA ATAGCTGCTT 
50
CCATttcaga caatcttcaa tacacaaact attcaaaaac cctgcaaaag 
100
caatttctaa ctagattcag cttttctttg ctactgtcaa aacctaaaag 
150
acaacaattt ggccataatt aaggactacg gacatcaata tcacaaaacc 
200
ctacctaatt tgttgtctta cccaacagcc acaatcaaac catgaccgac 
250
agatatcgaa actcaataac ttttctcaaa gttcagattt tttttttcaa 
300
aaattgacaa gatcgatcaa atgaggattt gtaaattgat cattcaatga 
350
gaagagtata atattttctc caagcttcca aacaaaaaaa aattcgaact 
400
ttccagagaa aaagagaatt attatccaaa tcaaattgaa ccgtaaaagg 
450
gaaaggattt ttaaaaattg acacttttta aacgagaaaa catataaaaa 
500
attagcgcta agaaacttca ttaaggaaaa caagattacc acctgcagaa 
550
ccaagaagaa ttttctactc ccgccggagg atgagtcgac tttttttttt 
600
tttttttttg aataattaag ggactaataa ctaattcatt tgataattaa 
650
tagagagaat aatggggttg gtgaagctga aacagtgatg cggggaaaaa 
700
tgtcgtttaa tctctcaact ttcaattgtc attttataca ttaatttgat 
750
atgcggccgt ttaatacata aactaaacgt tgattaattt aatgttttaa 
800
aaattagtca acgtttagtt catatattaa acagtcgcat atataaaatg 
850
gtatataaaa tgatcatttt ttgaaagttg agggattaaa tgacattttt 
900
ccccctttaa atatgtcatt agttgttttg accattttat aaacatttct 
950
taattatcct ctatttttct cctcaaaact ttttttttct tcacaaaatt 
1000
atcttcttta ttaaaagcaa aatatcttac taacacctaa gaaaactgag 
1050
gatacaaagc tcaaattcgg catcagaatt tttttggcaa aaaactactt 
1100
tctctgattt tttaattgat tttttagaaa aaacatatag attaaaataa 
1150
tatattaaaa ctaattataa atatattagt ttttatgatt tacatttcct 
1200
aaaaatcaat ttttttaaaa caattttttt tctaaaaaat caattaataa 
1250
gaaccaaaag aaatatatgt tatgaatatg aaattttcaa attcctaaca 
1300
acttcccctc attggtgctt gaaaaaaact aaaattgcca aaaactttta 
1350
taatctaatc gtcaaaaaac agaatttaga agatattatc aaactttgct 
1400
acatatccaa atttggttag tttattcaaa attaagaagt tttgctaaat 
1450
atattattgg attagtaatt agaaaatata caatcaaatc gtaaaaaaat 
1500
gaagtagtgg atttgaagtg atttaaataa ttttatatga caattcaaga 
1550
aaaattttag gttaaaaaca aattcaaatc tcataatttt agctgaattt 
1600
tgaaaaaatt tgaataacaa atttcctaat tcaaccaagt tgaccagaat 
1650
cataccaaaa cttattaaaa ctcaaataac ttttaatatt ttgtctttca 
1700
atacagtctc cttacatttg gtcatattta aaatcttcca tttatttcgg 
1750
ttacgaaaca attttacaag gcccatctaa attccgaatt tagtgtgtat 
1800
aatggattaa taatggtcat tagtggaaac gtgtagtgtt taaatccgtg 
1850
acatgcgtca aaagtttctt ccttattaat aagacggcac gacgtttagt 
1900
catattccaa cccgtttaaa acggcaccac gttttttcac cgtcctttca 
1950
tatttcttct cttattcctt aagtttttct cactgtgaag tcaaatcgat 
2000
gcctttcgtt cttatcaccg ccatggagaa acagagatcg aagaagacga 
2050
agatatccga tgatctaatt acatgcagtg gaaactcggt tcagattccg 
2100
tttgatctca tcccggagat actcaaaagg ttacctgtca aaaccctagc 
2150
taggttcctc tccgtatcaa aagaatatac ttccatcatt cgcaacagag 
2200
acttcATGAA ATCGTACTTG ATTAATTCTT CGACTCGCCC ACAAAGTCTC 
2250
ATCTTTACAA TCGCAGGCGG CGGAATCCAT TGCTTCTTCT CCTTGATTGA 
2300
TCAAGGTGAA TCAACTTCGT CTTCTAAACC AACTTACCTT ATGAATTGCC 
2350
CTCATCTACA GCTTAAAACC TTTGCTCCTT CTGTTCACGG TTTGATTTGC 
2400
CATGGACCTC CTTCTACACT AATAGTGTCT AGCCCTAGAC TAATAGTATC 
2450
TAACCCTAGC ACTAGACGAT CCATTATCCT GCCCAAGATT GATGCTAATC 
2500
ATGAATGTAT ATACCACCAT ATGGGTTATG ATCCTATTGA TGGTGATTAC 
2550
AAAGTGTTGT GTATGATGAA AGGCATGCAT GTTTATCAGA GACGGTATTT 
2600
AGCTAAGGAG CTTCAGGTTT TCACTTTGAG AAAAGGGAAT TCTTGGAGGA 
2650
TGGTTGAAGA TTTTCCTCCT CACTGTCTCT GTCATGAAGA TACTCCTGAT 
2700
TTGTGTATCA ATGGTGTTTT GTATTATGTA GCTATGCTCG ACACAGCTTC 
2750
GAATCATGCA GTCATGAGCT TTGATGTTAG ATCTGAAAAG TTTGATCTTA 
2800
TTAAAGGAGG ACCAGACGGG GACTTGAATC CAAAGCTGAC ACGCTACGAG 
2850
GGAAAGCCTG CACTCCTGTT TCCTGGATCT GATTATAGAA TTAACTTGTG 
2900
GGTTATAGAG GATGCTGCAA AACACGAATG GTCCAAGATG TCTTATGATG 
2950
TTTCGTCTAC TTCACTAATT CGCAATCCTT ACTTTCATCA TTGTGTCTTT 
3000
TGTACTAATG ATGCAGGGGA GATTGTTTTG GCACCCGACT TTGTGCGTAC 
3050
AAAAACATTT GTTGTTCTTT ATTATCATCC AAAGAAAAAT ACTATGAGAA 
3100
GTGTCGTCAT CAAAGGAATC AGAGATCGAA AGATTCCACT TTGGGATGAG 
3150
GCTTCATACC ATAGGATAAT CTCGGTCTTC TCTGGCCAGG TTGATAATCT 
3200
CATGTTTCTC TAAgaaatgt ttgttcttca tctttagatg tgtttcatcg 
3250
tacttgcttg ggaggttttt tgactatctt ttgtcctttg gttggtgaca 
3300
gtttgtttat ggacatagtc tcggcatgta tttaatatgt agactttctg 
3350
ttttgaactt ccttttatat atctaagtat ctaacaaaaa aaatgataga 
3400
actagttttc ttgaatgttg tgcttaatgc cctcatggtt agctttcaat 
3450
aatatccaat gttatacatg taatgcttaa tgctctcatg gttagaattt 
3500
ataaaggatc tataaaagct aaaaagtaaa tcgtcattct ttaagatact 
3550
caaaattaaa tttagcaaaa cttctcgatt tggagtgagc taacaaagtt 
3600
acgaatttgt agcaaagata tcttctataa tatgacttaa ataaattctg 
3650
ttttttggcg atttaactga agatattttt ctctcttctg cccgttgata 
3700
gggttagaat tattctcaca atccgagtat attgcatgcc atcttcactc 
3750
tcatccatcc atcaaatttt attttaatgt gataatgtta gtttatgata 
3800
aaaccttccc attataaaca aggcaacacg caacccatct cttcgtacag 
3850
gtattgcgac gttcgtatat ctccgccatg gaaacaatcg gagaaatctc 
3900
attataaaca atcagagact ttcttgcgtc tcctaatata tgcatcaatg 
3950
gtgttttgta ttatgaagct tttattgaca tcgctattac tcaagcagtc 
4000
ATGAGTTTTG ATGTCCGATC AGAAAAAATT GATCTAATAA AAGGACCAGA 
4050
GTTACCAGAC TACAACATGT TCATGAGTCA AAAGTTTACA AGCTACGAAG 
4100
GAAAGCTTGC AATCCTGCTC ACTGGTAATG GTGATTGTTC ATTTTATATG 
4150
TGGATTCTAG AGGATGCTGC GAAACATGAA TGGTCGAAGA AAGCTTATGT 
4200
TGTGCCTGAC TTTTTTCCTC TCGACCCTTT TGTGCTACTC ATGCAGgtga 
4250
gattattttg ttacgccatt ggtggcatac aaagacaatt agggttctct 
4300
attatcatcc aaagaaaaac acagtgaaaa tagtatacat agacggcgtc 
4350
aaagaaatga aggatccact ttgggataaa gattcttatc atgtcataat 
4400
ctctatcttc tctggccatg ttgataatct catgtttctc taaatagtgc 
4450
tcactctcac ctccacagag atgttaattt gttcttcagt tgtacttgta 
4500
tttcatctac ttacttagtt gggaggtttc atgatctttt gtctttgttg 
4550
gtgacagttt ttgtttattt tattaatagt ctccgctttg tctctgattt 
4600
tgcttactgt ttgaatgttt atatatctta catttaccat ttgatggaga 
4650
gattcttgga agatacattt aaaaaaaaaa ctatggacta aaaataaaaa 
4700
gcttcacatg tccagtcttt tagatttgtg taagaaatat taacacatcg 
4750
cttagtcttg ctaaatcaac aaacaattaa attatttcac atgatgcttt 
4800
ataactaaat tattttttct cttatttagt aatatgatgg atatttgttt 
4850
ctaatatata atgtgtaaac gattgccgtt tttaatcctc aagactcaac 
4900
aggccaacac taaacaaaaa aacaaaacgg gaaatatgtt ttactaaaaa 
4950
acagagagat tctgaaacgt ttgagaacgc ttaacttgtt ttctctcacc 
5000
gacatgaaaa acacagAGAG CAAATGAGAA TGACATTGTA AGAACATTTC 
5050
ACTACGACGA TAGAGTCGGA ACCAGCGACG CAATCGTGGA ATCAACACCG 
5100
GCGTCTCCAC CTAGGgttag gagacggaga aagaaggttt aagatgaacg 
5150
gagtctgctt ccgaaaccct agctaggttc ctctgcgtat ctgacacaat 
5200
cgtgaagata attgtttctt attctcatcg cttcaaactc aaaatccagg 
5250
cgaatcctct tttagctact taccttttca cacaattaat tgttcctttg 
5300
ttcacggttt gatttgctat agaacgctta tgcttctcaa cttgtggtat 
5350
acagttccag cactagaaga tccatcacat tgcctgaaat ggattcccaa 
5400
agctttgtca tgaaacactt cttgtgctat gatcccattg atagtgttta 
5450
caaagtcttg tgtatgacag gaccatggtg gatattgatg aatctgattt 
5500
agcctataca attttgccat tttggtaact cgattttcat ttctctgttt 
5550
tgtggttatg gccctcagtc cccagatcag tcactctttg agcagtcttt 
5600
tgtcatttag atttttagtt gaggaaatgt ttgccgtttc agtcctcaag 
5650
acccatcact cttttttcgg ttatttgtaa gaaaacggca acatgtttac 
5700
aaatcaaatg ggattctcaa agggtgaatt aaagggtttt cttttgtgcc 
5750
gcaaaagaaa aaataaacaa aagagtgaag caagaatggt agtatatgac 
5800
cctcttcgtt tgtacatctg gataatgcat ctagatgatc cattcagatg 
5850
atacacctag atgatgcatc tcgatgttat tcgtttacta atttggtagt 
5900
ccatctagat ggaacatatt acatataaat gaatctttgt tcgtttgatt 
5950
aatttattac aatttacatt cgcatctaaa tgcatgttat attaaaatga 
6000
ctaaaaagaa tatgttttca tttaaattat attatatggt tttggtgggt 
6050
aacgctattt cgctgttttt ttactaaaat tgtgatttta tagttttggc 
6100
ggaaaaatgt aattttatag ttttgtgggt tctagaggat gcagtgaaac 
6150
atgaatggtc aaagaagatt tttattttgc ctaattcatg tacaaattta 
6200
ctctagtgtg cgcttagtta tcatcgtttc gttaacgtta ctgatgcgga 
6250
tgagtttatg cgtttttggc ttgctccagC ATATTATGTT CTCCGTTATA 
6300
ATCCGAAAAG ATAgtatgtg agaaaagtcg tgatagaagg aatcctagag 
6350
cataagttct actgcatgga tggccgtttt tgtgttcctt cctatctctt 
6400
ctctactcag tatgagactc ttgtgttttt gtaagaatta gtagaccaca 
6450
agctcatggc cttttcgaga ccacacagac tatatatata ttttgtaatt 
6500
tggaaatctt tttgtatatt tctcttaaat ttttgttttc aaaaaatatt 
6550
tttcttttga acctgttgag tgataaaatc tacaatagag atttttgttt 
6600
agacttatga gaaaagaggt ttatatcttc aatgaaactt tgaaaattat 
6650
attaaattaa acaaaatgat tatattgatc ttaatcgagt gagtacaatg 
6700
aataatattt gaatacgagt gtttaagtat tagtgaattc ttgaggtagg 
6750
aggcgataat cttcccttaa tttgtcctct acttccttta tatatgtatt 
6800
tgatctaggt catagagtca cctatcgcac gtgccaacta cttccttaat 
6850
atcagGTCCG CTCCGAAATC TCCGCGGAGC TAAGTCTATC TTCAAAGTCT 
6900
CCTTTACTAT CATTCTGgtg ggttgacgga cctagaatgg gtcttcaagg 
6950
cccaattgtt gatctcttgt tattagataa ttatttaagg aacaagatat 
7000
taaagtgtgc ctcttaactt cataactcta tcccaagtat aagatgaagc 
7050
tttaaaataa atttaatctc atgccaaaga ttttattttt aagatacata 
7100
aatgttaggg ttagagctac atttaattat gtgcatgaca tggaaaatca 
7150
cctaattaat agtatttatt aatttaggta aatttgtaca aaattttaaa 
7200
atatcacttt aggctattta aagaataaga aaggaagcat gaaaagtaac 
7250
atttaactag aactgtatat aaattgttga acatatgcat tgcatggtat 
7300
caaacatttt caaatctgtc atattcagaa aacgtttata gttaattttt 
7350
tcagAAAACG TTTATAGTTA AGTTAATTAT GATGAAAGAT TTCCAACTAG 
7400
ATGGTGATAT GATCATATCG AAAACGCTAT CACGTACTGA TGTTGACCAC 
7450
CATGGACGTC TGTTTTTACC CAAAAACCAA GTGCTCTCGG TCTTGAAAAA 
7500
GATGAGAAAT GTTACAAAAG AGAGCTTGCG AAAGGGTATT GAACTCGAAG 
7550
TTGTAGACAT CATTGAAAAC GATTCATACT CTGTTATCCT AAAGTCCAGG 
7600
AACACCACCA ACGATTTTGT TCTGGCATCG GGTTGGAGCA TTATGAAGCA 
7650
TTCATTAGAC CTCCAAGAAG GTGATGATAT CAAACTATTT TGGGATTACT 
7700
TGAATTACAA ATTCATTATT CTCAATTTCG AATACAACTT AATTCCCTAA 
7750
ttatgtcatg gagcgtgcaa gttcgcttac aacttccttc cgctttctta 
7800
tttttaagtt gcgttaattg tgtttccgat tttatatcta cataacaact 
7850
atctttagat gtaatcattt gcaaatattt cttaaaaagt tgaatatata 
7900
tgttaagatc taagattgaa tgagagattg gtctattata ttatttaaca 
7950
atcccgcttc gagcattcat tctctaaact attatcgtta aactattctg 
8000
atctatattt aactttcaca atttttacca agatcataat aattagttta 
8050
tattgcctct aacagttctc aaatgatgtt tcaattatta ttgatttctt 
8100
acaagtttga taatattgtg cttttgaatT TATGAAACCA AGCCTCTCTT 
8150
AGAAACTGTG ACTTTAAGGC CATGTTTCAT GTGAAGGATT ATGGAAGAAG 
8200
CTGGCTCGAT CTTGTGCCCT TCAACGACCT TGATGTCATA ATTTCGTATG 
8250
ATCTCAACAG CTACTGTCTT CATCTGCAAG AAAGATAAAT TTTTCCCCAA 
8300
GCAGTTTCTT GGACCAGAAT TAAACACGAA GAACTTGAAA GATGGTTCAT 
8350
GTTTCAAGCC TCCATTTCTC TCAGAGATCC ATCTCTCTGG TTTGAATTCA 
8400
GACGCGTCCT GTCCCCACAC GGACCTCATC CTCCCCAATG CATAGACAGA 
8450
GAACAAAATC TTCCAATTTT TATCGACCAT GTGTCCACTT GGAAGCACAT 
8500
CTTGCTTTAT GGGAGTCTTT CTCTCGAACG GGATTGGCGC GTAGAGGCGT 
8550
AGTGATTCAC ACAATGCACC ATGTAAATAT ACCATCTTGT TTAACTTGTC 
8600
TGCATCTAAA CTCATTCCGG ATCCTGGTAG ATTTGTGTTG ATCTCTTGGC 
8650
GGATCTTGGT CACAGCTTCA GGGTTCTTGG AGAGAAGCCA GAAGAACCAA 
8700
GTGAGAGTTG TTGCAATGGC GTCTCTTCCA GCAAGCATGA AACTCTTGAT 
8750
GATGTCTTTA AGGAAGTTAT CATCGTTTGG GTTCAAAAGC TCATACTTGG 
8800
AAATATCTAG ATTCATGTAG ACGCTTAATA AATCCTCTGC ATGAGCTTCT 
8850
CCTCCAATAT TAGAATGATG ACTTATTATC TCCTCCCTCT TTGCAGATAT 
8900
ATACTTTGCA CAAGATCTGT CAAAAGCGGC ATTAGCTTCC TTCATCTTCT 
8950
TCTCTTCTCC GAGTCCAATC CAGTTTTGCA GCTTCCACAA GACCACAGGC 
9000
TTGACATGTC TGTACACAAC CACTTCTTCA GCATCATCCA TAGCTTTAGC 
9050
ATACTCATTC TTTGGCATTT CAATGGAAAG AGAACTTGAG TCACAACCCG 
9100
TAACCAGAGT AAGGGTTACA TCGAATGCTA ACCTCTGGAA CACGTCTTGT 
9150
AAATCGAAAA CCGTATTAGC CTCCGCAAAA TGATCAAGAA CGGGGACAAG 
9200
CCCGTTCTTG ATTTTACACG TGATGGTCCT CAATGAGAAG CTTTGAAAC
9250