fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G26580 YAB5 YABBY5, plant-specific transcription factor YABBY family protein (.1.2)

>AT2G26580.2 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 220
PvuII CAG|CTG 155


Click here to view TAIR data

>AT2G26580.2 length:495
ATGGCTAACT CTGTGATGGC AACCGAACAG CTCTGCTACA TCCCTTGCAA 
50
CTTTTGCAAC ATAATTCTTG CGGTGAATGT CCCATGCAGC AGCCTGTTCG 
100
ACATCGTGAC CGTCCGATGC GGTCACTGCA CCAATCTGTG GTCTGTAAAC 
150
ATGGCAGCTG CTCTTCAGTC GCTTTCACGC CCTAATTTCC AGGCAACAAA 
200
CTATGCAGTA CCAGAGTATG GATCCTCCTC AAGAAGCCAC ACAAAAATCC 
250
CTTCAAGAAT TTCAACTCGT ACCATAACTG AGCAACGGAT TGTAAACCGT 
300
CCTCCGGAGA AGCGGCAGCG AGTACCTTCT GCGTACAATC AATTCATAAA 
350
AGAGGAAATT CAGAGGATTA AGGCGAATAA TCCAGACATA AGCCACAGAG 
400
AAGCATTCAG CACTGCTGCC AAGAATTGGG CACACTTTCC TCATATTCAC 
450
TTTGGTCTAA TGCTGGAGAG TAACAAGCAA GCTAAGATAG CCTAA
500

>AT2G26580.2 longest ORF length:164
MANSVMATEQ LCYIPCNFCN IILAVNVPCS SLFDIVTVRC GHCTNLWSVN 
50
MAAALQSLSR PNFQATNYAV PEYGSSSRSH TKIPSRISTR TITEQRIVNR 
100
PPEKRQRVPS AYNQFIKEEI QRIKANNPDI SHREAFSTAA KNWAHFPHIH 
150
FGLMLESNKQ AKIA
200