fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27410 Domain of unknown function (DUF313) (.1)

>AT2G27410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 588
KpnI GGTAC|C 846
StyI C|C[AT][AT]GG 891


Click here to view TAIR data

>AT2G27410.1 length:930
ATGGCGAAAC CTGGTTTTAA TCGAAACAAA AAGATGGTGA AACATGATGA 
50
TCTTATTGTT TCACTGATGA GTCGTATTTC AGAGGATACG TTGCTAGAAA 
100
TTGTCGGACA GAGGGTAGAG AACATGTATG CCAACCACAC AGAATCTCAA 
150
ACGACGAGTC CTGGAAAACA CCAAACTGTT GATCCTAATA TCTCTGGGGA 
200
TGCAGTGCCA ATAAAGAAGA GAGGTCCTTG TCACCGATCA TCTTCTTCTC 
250
CCACGAAGAC AACAACATGT ACGCGTGCGC TCGAACAACA AAGATCAATC 
300
ACTTCCGTGG AACCAGTACT ACACAAAACC CTAATCGAGG AGGAACCCAT 
350
TCAAACAACT CCACCGGAGT GGCTCTTGAA CGTCATGAGG AGAGAAGAGA 
400
ACGGTTACAA TCCGAAGTTG ATCTCAACGA GGCAACTGTA TAAGACCGAT 
450
CTCAAAAAAA CTGAAGCACG TCTCTCAGTT CCTTTTAAGC AGGTGAAAAC 
500
TCCGGACTTT TTGACAGAGG ACGAGACAAG AATCATACAT GAGAATGCCA 
550
TGAAGATTCG TGACAATGGT GTGCCTGTGA ATTTCGTGGA TCCTGAGCTG 
600
AATAAGCATG TGCTTGAATT GAGGAAGTGG AAAATGAAAG GAAACTGGAT 
650
TTATGTCTTT GTTAAAGGTT GGAAAAACGT GCTTGATGCT TGTAAGACGT 
700
TGTTTAAGGA AGACGACGTC TATCCTCTCT GGTCTTTCCG ATCTGGAACA 
750
GGCAAACTCT GTTTTGCTCT CACCCCTAAA AACTCTGGCC GTGGAAACTC 
800
TCTTCCTGGC GGTGATGGCG CTTCTACTTC CGGTGAATCT GGTCAGGTAC 
850
CATTACCCAT TCCTCCGGCA AGATATTCTA GCAACTCCGG CCAAGGCTGT 
900
TCAGGAGAGA GCAGCTCTAG TTCTTCCTAA 
950

>AT2G27410.1 longest ORF length:309
MAKPGFNRNK KMVKHDDLIV SLMSRISEDT LLEIVGQRVE NMYANHTESQ 
50
TTSPGKHQTV DPNISGDAVP IKKRGPCHRS SSSPTKTTTC TRALEQQRSI 
100
TSVEPVLHKT LIEEEPIQTT PPEWLLNVMR REENGYNPKL ISTRQLYKTD 
150
LKKTEARLSV PFKQVKTPDF LTEDETRIIH ENAMKIRDNG VPVNFVDPEL 
200
NKHVLELRKW KMKGNWIYVF VKGWKNVLDA CKTLFKEDDV YPLWSFRSGT 
250
GKLCFALTPK NSGRGNSLPG GDGASTSGES GQVPLPIPPA RYSSNSGQGC 
300
SGESSSSSS
350