fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27410 Domain of unknown function (DUF313) (.1)

>AT2G27410.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, NcoI, NdeI, NotI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 4698
BglII A|GATCT 6111
EcoRI G|AATTC 116, 1852, 3261, 3948, 6479
EcoRV GAT|ATC 2404
HindIII A|AGCTT 506, 1789, 2249, 2625, 2921, 5216, 5781, 6064
HpaI GTT|AAC 5893, 5911
KpnI GGTAC|C 3828, 4956
NheI G|CTAGC 244, 2220
PacI TTAAT|TAA 3639
SpeI A|CTAGT 2460
StyI C|C[AT][AT]GG 413, 1647, 2946, 3327, 3824, 5001


Click here to view TAIR data

>AT2G27410 genomic sequence (4001-4339,4450-5040,) length:6539
gaattgttag agaacgagtt ggagatgtga aacacaaaga gcatgacaag 
50
taaatgtttt tatctaagaa cataatcgtt tttctgaggt taataatctt 
100
attcataaaa gtgtcgaatt cggaaggtta gttgaaacgg tctattagac 
150
gactacaatt tgattataca ccgttgaaga ctccatgttc atgatagact 
200
acacaacttt tattggagga gtttgacaac atgctaagca tttgctagcc 
250
atgtaaatgg caacatttag atataaagtc catgataaaa gcgtttttgt 
300
tacttgtaag caacattgct tttgaaaggc aaacccaaga ataaaggagt 
350
aaagattaat gcttgacgtg aagaattttc aacatacaag gtcaagaaac 
400
ggttcaagtc cccctaggag ggacttgagc attttaatag ggactttcaa 
450
ttcaagctaa atgattagat tacaaaccat gaatggggag tatgtatcac 
500
actggaagct ttatctttag acttcaggta cactaaacct tgaaaactaa 
550
gaaaattgat tttaaagtac attttggttt cagccatcag ccatgacggg 
600
gaaaaatgaa aaaaacacaa atcataattc ccaatgatac gtgaaatagt 
650
agaacatgaa ggttgtgatt ggtgtgtaga tatatagagt taaaaaaagt 
700
tgacaagtaa aaaagtaaag ttagcgcgaa attttttctc atgttttaaa 
750
agtaggtgaa acgtttcgtt ttattgtttt tgactttttc cctattttaa 
800
gagtaaatga gttgaaaaat attttcagct attattattc tgattggcta 
850
aattttggtg ggaatgggta gaattttttc ttttgctttt tttttctttt 
900
gcgctatttg tgaaacagcc aaaattaaca aagcaaaaac ttaaaaatca 
950
atcaaaagaa tttaaagcct taatgccgag attcgagaca agggccactt 
1000
gccttaggga gttacttcaa ccatttacag caataacatt atctacataa 
1050
caataacttt gcaagttgta attgtaagag agtagagcca cttgaaaaaa 
1100
tcagttattg cattatggag ttacatgata ggatttgacc agacacaaca 
1150
gcaaaagcaa aaatggattt ttaaattatt ttctatgaaa aaattcaatt 
1200
tcacaattta tattgattcg attacgaaat attgttgttt gcttgttcac 
1250
gttgtcgaag gcatggtata acggaatact aataaaatag aatagaccaa 
1300
cttggtcaaa tactaaaaag aaagcctcgt tgacgcagaa acgaaaaaaa 
1350
tgaataaaaa gaacacaaaa agtaaacaaa aattactcgt ccaattattt 
1400
gctagaattt gataccaatc tctgtattat ttccgattgt tttggttcta 
1450
ttcgaagatc gtataatatg aattattcgt ggacactcac acactcatct 
1500
cgactattta gggagataag atttgtgaga ccagcgtatt tagataattt 
1550
aaaatacatt tatttgtttg gaaccaatac atattcgctt tttaatattt 
1600
gtgatttcct ttgcttctac ctgattttat attttaacaa ttgctgcctt 
1650
ggctcgtgtg gtctgcgaat gcactaagag tacaacgtgt gacgtgtaca 
1700
atgttcgagc aaggcacagg tagagagata aatatagacc acaaaaccaa 
1750
agcaaaaaaa aaaaaaatca agaatggctt tgtaccataa gcttagtttt 
1800
caaaacggta tatcatgcga acctcccaaa ctttaaccag ccaatacaaa 
1850
cgaattctca ccgagttaaa acttgaccat taactttgag tgaaggctga 
1900
agcatataaa aactggcaaa tagaatctaa catcaataat gttgcaattt 
1950
gttttttccc atgtcatttg gtcccacttc cttagtatat ttaaaccaca 
2000
cactcaacat cgcaccacac acttcactca caatttctta tataagacca 
2050
ttttggcata cccgcttctt ggcaaaccaa gtaacaaaaa ccaaaacatt 
2100
tgtattataa gagtattttt attgatacta tttttaaatt gtgcccatac 
2150
atattaccta tagggaATGG CGTCAACTAT CATCTTCATT CTAACTATTT 
2200
TTTTAAGTTA CAGAACTTCG CTAGCTACAT CTCGTGGTAG CCTTTTTGAA 
2250
GCTTCTGCCA TTGAGAAACA TGAGCAATGG ATGGCTCGAT TCAATCGCGT 
2300
TTACTCTGAC GAAACCGAGA AAAGAAATCG GTTTAATATC TTCAAGAAGA 
2350
ATTTGGAGTT CGTCCAGAAC TTCAACATGA ATAATAAAAT CACGTACAAG 
2400
GTTGATATCA ACGAGTTCTC TGATCTTACG GACGAAGAAT TTCGGGCGAC 
2450
ACACACTGGA CTAGTTGTGC CCGAGGCTAT AACCAGAATT TCAACTCTGT 
2500
CTTCGGGCAA AAACACGGTG CCGTTTAGAT ATGGTAATGT TAGTGATAAT 
2550
GGCGAGAGCA TGGATTGGAG ACAAGAGGGG GCTGTTACAC CCGTTAAGTA 
2600
TCAAGGCCGA TGTGgtaatt atttaagctt tgttttttat aacaatctgc 
2650
attatttggg cttgacgtca ctatgttgat tctttttttt tggattttaa 
2700
tttttgttcc ttaacaaaaa acaaaagaat agagagatac attgttttaa 
2750
acatgaattt tttgaaaacg gaatagGAGG ATGCTGGGCG TTTTCCGCGG 
2800
TGGCGGCAGT GGAAGGCATT ACAAAGATTA CTAAAGGCGA GCTTGTATCG 
2850
CTATCGGAGC AACAACTCTT AGACTGCGAC AGAGACTACA ATCAAGGATG 
2900
TCGTGGAGGG ATAATGTCGA AAGCTTTCGA GTACATAATC AAAAACCAAG 
2950
GCATCACTAC TGAGGATAAC TATCCATACC AAGAATCACA ACAAACTTGT 
3000
AGTTCATCAA CTACCCTATC ATCGTCTTTT CGTGCAGCCA CAATCAGCGG 
3050
ATATGAGACC GTTCCAATGA ATAATGAGGA AGCGTTGCTA CAAGCAGTGT 
3100
CTCAACAGCC TGTTTCTGTG GGGATAGAAG GGACAGGGGC CGCGTTTAGG 
3150
CACTACTCGG GAGGGGTATT CAACGGAGAA TGTGGGACGG ATTTGCATCA 
3200
TGCGGTTACA ATTGTTGGTT ATGGAATGAG TGAAGAAGGG ACTAAGTATT 
3250
GGGTGGTGAA GAATTCTTGG GGGGAAACTT GGGGAGAAAA TGGTTACATG 
3300
AGGATCAAGA GAGACGTGGA TGCACCCCAA GGAATGTGTG GTTTGGCCAT 
3350
TCTTGCTTTC TATCCACTTG CTTGAataca tgaagattga ttgggtgggc 
3400
ttgaagtagt tgaaagtatt ctgatcaaaa tgttattttg agaaacatta 
3450
tggtccccat gttttcgtgc aaatggattg atatatattt ttaatctgat 
3500
gtgggtagaa gaataaaagc accaagtaaa agtttaaatt gcttgaaacc 
3550
agaaaaaaaa aaaaaaaaaa aacgtaagca caaaagaaaa cagaggactt 
3600
tagtcaattt acatttttca caaatgaaag catatattaa ttaagttggt 
3650
gtaacatgtt caggtgaacc aagtgattaa aaatgagaca tgacatatta 
3700
ataagcgtag gacctgaatc ttattaaaac cggtctaaat ctgagaaccg 
3750
gccttaatta ggttttctct gttttcttaa tctcgtaaag aggcggtgcc 
3800
tttctctctc tctctcttaa ttaccaaggt acctgaatta ttatataaga 
3850
tcatcattac acaaacccga ttaccctatc ttctctctcg ctcttggctt 
3900
ttgttccttg cgtgcaaagc aacccttttt ctctctaact agaactcgaa 
3950
ttccttctag gtttttttgg ggttctattt tgtcaagaga tttgatcata 
4000
ATGGCGAAAC CTGGTTTTAA TCGAAACAAA AAGATGGTGA AACATGATGA 
4050
TCTTATTGTT TCACTGATGA GTCGTATTTC AGAGGATACG TTGCTAGAAA 
4100
TTGTCGGACA GAGGGTAGAG AACATGTATG CCAACCACAC AGAATCTCAA 
4150
ACGACGAGTC CTGGAAAACA CCAAACTGTT GATCCTAATA TCTCTGGGGA 
4200
TGCAGTGCCA ATAAAGAAGA GAGGTCCTTG TCACCGATCA TCTTCTTCTC 
4250
CCACGAAGAC AACAACATGT ACGCGTGCGC TCGAACAACA AAGATCAATC 
4300
ACTTCCGTGG AACCAGTACT ACACAAAACC CTAATCGAGg tttagaaccg 
4350
tctccttctt cttatgttac tcgtcggtcc aaagaaaaac gtcccattaa 
4400
tgtggaaaag agaagtcaca agaaacgcaa aatcatttgt cctttagagG 
4450
AGGAACCCAT TCAAACAACT CCACCGGAGT GGCTCTTGAA CGTCATGAGG 
4500
AGAGAAGAGA ACGGTTACAA TCCGAAGTTG ATCTCAACGA GGCAACTGTA 
4550
TAAGACCGAT CTCAAAAAAA CTGAAGCACG TCTCTCAGTT CCTTTTAAGC 
4600
AGGTGAAAAC TCCGGACTTT TTGACAGAGG ACGAGACAAG AATCATACAT 
4650
GAGAATGCCA TGAAGATTCG TGACAATGGT GTGCCTGTGA ATTTCGTGGA 
4700
TCCTGAGCTG AATAAGCATG TGCTTGAATT GAGGAAGTGG AAAATGAAAG 
4750
GAAACTGGAT TTATGTCTTT GTTAAAGGTT GGAAAAACGT GCTTGATGCT 
4800
TGTAAGACGT TGTTTAAGGA AGACGACGTC TATCCTCTCT GGTCTTTCCG 
4850
ATCTGGAACA GGCAAACTCT GTTTTGCTCT CACCCCTAAA AACTCTGGCC 
4900
GTGGAAACTC TCTTCCTGGC GGTGATGGCG CTTCTACTTC CGGTGAATCT 
4950
GGTCAGGTAC CATTACCCAT TCCTCCGGCA AGATATTCTA GCAACTCCGG 
5000
CCAAGGCTGT TCAGGAGAGA GCAGCTCTAG TTCTTCCTAA tcataactct 
5050
gcttatttct taagccacaa gtaaaaagga tttagttttc aggcaattca 
5100
ggcttggttt tctttctttt ttgttcagtt gatgaaacag tggggttttg 
5150
tccaaatagt ggggtttctc tttttgttca gttgatgata tgatgttttg 
5200
aatttagatt tcttaaagct taactttcta gttgaataat ttgaaagttc 
5250
ttttagttat cctttgagag tttgtttttt tatctctctc tgaaatatgc 
5300
ctgaagctgc ctaagtttac ttatgcagaa caaacgagaa cttgttttct 
5350
tatattatca caagaagatc catcaggcta caacaacacg caacaagtgt 
5400
aaagtttctt ggctctctaa actcaaaagt ctaagttgga tcaatcatca 
5450
ccataggcct tgaaacaata taaggagcgt taaagaaaag atcagcTTAC 
5500
AACCGTTTCT TTGAAACTTT CCTTTCCACT TTAACATTGT ATAACTCCTC 
5550
CAACGGTTTC TCTGTCTGCA TACAAGTCAC CCTAAAGGCT CTCTGAACAG 
5600
ACAGGTTATT TGTCTTCTTA CATGTAGTGA CAGAACCTGG GAATGATGTG 
5650
GTCATtatca gacttgtgac ttgtcatggc tgcttctatc caatcttgtg 
5700
aaacctaaga tccacaatga acttttgaaa acacatatcg aaacattgtt 
5750
gttgaagttt cgacacctct acaacacctc aagcttaaaa gcaatgcaat 
5800
aaacatcaac gcaagatcac agcaaaaaca gagcaaagaa gaagtcgaaa 
5850
cagaacagag aaagagaaga aagaagagca cacaagtgat ttgttaaccc 
5900
ggttcatggc gttaacgagc cactacatcc ggtcgggatc aacaaatccc 
5950
caactccact atgaagaaga aggtgtttac aaatgataca agtgattgtc 
6000
taaagctctt cactagctaa gattcattgt ctctcatcat ttgactactt 
6050
aagaaactac ccaaagctta cactttcttg tttctaaaac ccccttgttt 
6100
ctccctccat agatctacat tgttttctta agctctctct ttcggccgct 
6150
tggcttgcga catcctacct tgtgtgtctt caagagttct tatagcaaga 
6200
cactccttag acctaatgct tctaccaaac gctccttttg caatcacaaa 
6250
tggacaaagc gtccttcttg gccagcgatg cacaaggctc ctccttgtgg 
6300
tcccaaaagc ataactcaac cagagattaa tatactttta actctagtta 
6350
gctttctttg attttccttg tatatttgaa catactgttc tcatttcaac 
6400
aattgtgatg ttaaaagtcc tcttaactcc tgaaacagag aaagaaagtg 
6450
aattttctaa agtctagtgt gtaaaagtga attcttgtaa agcgtaaggc 
6500
ttaatcattc taacctcttg caatagctta catgaatca
6550