Locus |
Common name |
Short description |
AT2G28610 |
PRS1, PRS, WOX3 |
WUSCHEL RELATED HOMEOBOX 3, PRESSED FLOWER 1, PRESSED FLOWER, Homeodomain-like superfamily protein (.1) |
>AT2G28610.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsoBI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstUI, BstXI, BstYI, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NciI, NcoI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, StuI, StyI, SwaI, TliI, Tsp45I, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
77 |
AluI
| AG|CT |
115, 198, 460, 505 |
AlwNI
| CAGNNN|CTG |
199 |
ApaI
| GGGCC|C |
588 |
AvaII
| G|G[AT]CC |
540 |
BanII
| GPuGCPy|C |
588 |
BclI
| T|GATCA |
387 |
BfaI
| C|TAG |
183, 212 |
BsaHI
| GPu|CGPyC |
33 |
BsaJI
| C|CNNGG |
677 |
BsaWI
| [AT]|CCGG[AT] |
68 |
BsiEI
| CGPuPy|CG |
558 |
BsiWI
| C|GTACG |
554 |
BslI
| CCNNNNN|NNGG |
441 |
BsmI
| GAATGCN| |
91 |
Bsp1286I
| G[GAT]GC[CAT]|C |
588 |
BspDI
| AT|CGAT |
288, 322 |
BsrI
| ACTGGN| |
164, 448 |
BssKI
| |CCNGG |
677 |
BstF5I
| GGATGNN| |
570 |
BstNI
| CC|[AT]GG |
677 |
BstZ17I
| GTA|TAC |
77 |
ClaI
| AT|CGAT |
288, 322 |
DdeI
| C|TNAG |
201 |
DpnI
| GA-CH3|TC |
49, 109, 265, 323, 386 |
DpnII
| |GATC |
49, 109, 265, 323, 386 |
Fnu4HI
| GC|NGC |
406 |
HaeIII
| GG|CC |
587 |
HinfI
| G|ANTC |
2, 83, 139 |
HpaII
| C|CGG |
35, 67 |
Hpy188I
| TCN|GA |
29, 86 |
Hpy99I
| CG[AT]CG| |
31 |
HpyCH4III
| ACN|GT |
556, 718 |
HpyCH4IV
| A|CGT |
153 |
HpyCH4V
| TG|CA |
96, 491, 522 |
MboI
| |GATC |
49, 109, 265, 323, 386 |
MseI
| T|TAA |
306, 730 |
MslI
| CAPyNN|NNPuTG |
646 |
MspI
| C|CGG |
35, 67 |
MwoI
| GCNNNNN|NNGC |
123 |
N.BstNBI
| GAGTCNNNN|N |
7 |
NdeI
| CA|TATG |
383, 391 |
NlaIII
| CATG| |
424, 630, 640 |
NlaIV
| GGN|NCC |
167, 540, 588 |
PspGI
| |CC[AT]GG |
677 |
PspOMI
| G|GGCCC |
588 |
RsaI
| GT|AC |
64, 553, 720 |
Sau3AI
| |GATC |
49, 109, 265, 323, 386 |
Sau96I
| G|GNCC |
540, 587 |
ScrFI
| CC|NGG |
677 |
SspI
| AAT|ATT |
485 |
Taqƒ¿I
| T|CGA |
141, 287, 321, 559 |
TfiI
| G|A[AT]TC |
139 |
TseI
| G|C[AT]GC |
406 |
Click here to view TAIR data
>AT2G28610.1 length:735
ATGAGTCCTG TGGCTTCAAC GAGGTGGTGT CCGACGCCGG AGCAACTGAT | 50 |
GATCTTGGAA GAGATGTACC GGAGTGGTAT ACGGACTCCG AATGCGGTGC | 100 |
AGATACAACA GATCACAGCT CACTTGGCGT TCTATGGAAG AATCGAGGGC | 150 |
AAAAACGTCT TTTACTGGTT CCAGAACCAT AAGGCTAGAG ATAGACAGAA | 200 |
GCTGAGGAAG AAACTAGCCA AGCAACTTCA CCAGCAACAA CATCAACTTC | 250 |
AACTCCAACT TCAGCAGATC AAACCAAAAC CAATATCATC GATGATTTCT | 300 |
CAACCAGTTA ATAAGAATAT CATCGATCAT CACAATCCTT ATCATCATCA | 350 |
CCATCATAAT CATCATCATA ATCATCATCG TCCATATGAT CATATGTCCT | 400 |
TTGATTGCTG CTCTCATCCT TCTCCCATGT GTCTTCCTCA TCAGGGAACT | 450 |
GGAGTAGGAG AAGCTCCAAG CAAAGTGATG AATGAATATT ACTGCACCAA | 500 |
AAGTGGAGCT GAAGAGATAT TGATGCAAAA ATCAATCACG GGTCCAAACT | 550 |
CATCGTACGG TCGAGATTGG ATGATGATGA TGGATATGGG CCCACGACCA | 600 |
TCATATCCCT CATCATCATC ATCACCCATT TCATGTTGTA ACATGATGAT | 650 |
GAGCAGTCCA AAGATACCAT TGAAAACCCT GGAACTTTTC CCAATCTCAT | 700 |
CTATCAACTC CAAACAAGAC AGTACCAAAC TTTAA | 750 |
>AT2G28610.1 longest ORF length:244
MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG | 50 |
KNVFYWFQNH KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPISSMIS | 100 |
QPVNKNIIDH HNPYHHHHHN HHHNHHRPYD HMSFDCCSHP SPMCLPHQGT | 150 |
GVGEAPSKVM NEYYCTKSGA EEILMQKSIT GPNSSYGRDW MMMMDMGPRP | 200 |
SYPSSSSSPI SCCNMMMSSP KIPLKTLELF PISSINSKQD STKL | 250 |
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