fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G28610 (PRS1, PRS, WOX3)

Alias PRS1, PRS, WOX3
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / WUSCHEL
AtTFDBHomeobox / WOX
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description WUSCHEL RELATED HOMEOBOX 3, PRESSED FLOWER 1, PRESSED FLOWER, Homeodomain-like superfamily protein (.1)
TAIR annotation Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia. (.1)
Gene model
Gene model cDNA support
AT2G28610.1 6
Entry clone (w/o stop) RE_01G12_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10865: developmental processes ->stipule development
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 48513: developmental processes ->animal organ development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 8283: other biological processes ->cell proliferation
(P) 9908: developmental processes ->flower development
(P) 9943: developmental processes ->adaxial/abaxial axis specification
(P) 9947: developmental processes ->centrolateral axis specification
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean 1 1
rice 1 1 2
sorghum 1 1
physcomitrella
Total 2 1 1 4
Repression motif 
HQQQHQLQLQLQQIKP at 81/244 in AT2G28610.1
KIPLKTLELFPISSIN at 225/244 in AT2G28610.1
Repression motif
in putative orthologs		 
CRPLKTLELFPTKSTS at 172/234 in rice Os039714 (Type Ia)
TRPLKTLDLFPLTTTR at 202/223 in soybean Gm049699 (Type Ib)
CRPLKTLELFPTKSTS at 172/234 in rice Os037228 (Type II)
RRPLKTLDLFPTKSTG at 232/260 in sorghum Sb011646 (Type Ia)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
abnormal stem (A20060, A20131, A20139, A20140, A20066), bushy (A20066), abnormal seedling (direct input), abnormal shaped leaf (direct input, A20060, A20131, A20139, A20140, A20066), rough surface leaf (direct input, A20060, A20131, A20139, A20140, A20066), sterile or low fertility (A20060), abnormal leaf (A20131, A20139, A20140), long hypocotyl (direct input), abnormal petal (A20060), abnormal shaped silique (A20060, A20131, A20139, A20140, A20066), abnormal flower (direct input, A20131, A20139, A20140, A20066)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
ID Species Construct Date Comment Phenotype Photo
ID34 Chrysanthemum 35S:AtCDS-SRDX 2005-08-18   no phenotype   
ID55 Gentiana AtACT2pro:AtCDS-SRDX 2005-08-31   No phenotype   
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