Locus |
Common name |
Short description |
AT2G32460 |
ATMYB101, AtM1 |
ARABIDOPSIS THALIANA MYB 1, myb domain protein 101 (.1.2) |
>AT2G32460.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, EagI, EarI, EciI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
179 |
AciI
| C|CGC |
1397 |
AluI
| AG|CT |
267, 367, 897 |
ApoI
| Pu|AATTPy |
774, 1346 |
AvaI
| C|PyCGPuG |
1031 |
BanI
| G|GPyPuCC |
1395 |
BanII
| GPuGCPy|C |
284 |
BclI
| T|GATCA |
474 |
BfaI
| C|TAG |
878, 893, 936, 1458 |
BglII
| A|GATCT |
468, 843 |
BlpI
| GC|TNAGC |
266 |
BsaAI
| PyAC|GTPu |
100 |
BsaBI
| GATNN|NNATC |
250, 473, 1292 |
BsaJI
| C|CNNGG |
64, 1391 |
BsaWI
| [AT]|CCGG[AT] |
158 |
BslI
| CCNNNNN|NNGG |
978, 1010, 1079, 1341, 1432 |
BsoBI
| C|PyCGPuG |
1031 |
Bsp1286I
| G[GAT]GC[CAT]|C |
284 |
BspHI
| T|CATGA |
390 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
1395 |
BssKI
| |CCNGG |
306, 603 |
BstAPI
| GCANNNN|NTGC |
172 |
BstF5I
| GGATGNN| |
4, 82, 351, 1222 |
BstNI
| CC|[AT]GG |
306 |
BstYI
| Pu|GATCPy |
220, 468, 843, 1416 |
BtgI
| C|CPuPyGG |
64, 1391 |
DdeI
| C|TNAG |
146, 265, 298 |
DpnI
| GA-CH3|TC |
85, 219, 244, 325, 467, 473, 581, 616, 842, 855, 1127, 1415 |
DpnII
| |GATC |
85, 219, 244, 325, 467, 473, 581, 616, 842, 855, 1127, 1415 |
DraIII
| CACNNN|GTG |
1340 |
DrdI
| GACNNNN|NNGTC |
889, 958 |
EaeI
| Py|GGCCPu |
202 |
EcoNI
| CCTNN|NNNAGG |
1010, 1079 |
EcoRI
| G|AATTC |
774, 1346 |
Fnu4HI
| GC|NGC |
572, 1397 |
HaeIII
| GG|CC |
60, 201, 605, 1318, 1423 |
HindIII
| A|AGCTT |
268 |
HinfI
| G|ANTC |
191, 395, 494, 624, 1014, 1039, 1115 |
HpaII
| C|CGG |
157, 199, 603 |
Hpy188I
| TCN|GA |
768, 777 |
Hpy99I
| CG[AT]CG| |
19, 25, 73 |
HpyCH4III
| ACN|GT |
112, 182, 1215, 1392 |
HpyCH4IV
| A|CGT |
99, 1050 |
HpyCH4V
| TG|CA |
135, 1308 |
MboI
| |GATC |
85, 219, 244, 325, 467, 473, 581, 616, 842, 855, 1127, 1415 |
MseI
| T|TAA |
440, 1121 |
MslI
| CAPyNN|NNPuTG |
349 |
MspI
| C|CGG |
157, 199, 603 |
MwoI
| GCNNNNN|NNGC |
172, 291, 1447 |
N.BstNBI
| GAGTCNNNN|N |
1019 |
NciI
| CC|[CG]GG |
603 |
NlaIII
| CATG| |
389, 1437, 1453 |
NlaIV
| GGN|NCC |
1383, 1395 |
NspI
| PuCATG|Py |
1454 |
PaeR7I
| C|TCGAG |
1031 |
PflMI
| CCANNNN|NTGG |
978, 1341 |
PspGI
| |CC[AT]GG |
306 |
RsaI
| GT|AC |
97, 499, 760, 1186 |
Sau3AI
| |GATC |
85, 219, 244, 325, 467, 473, 581, 616, 842, 855, 1127, 1415 |
Sau96I
| G|GNCC |
60 |
ScrFI
| CC|NGG |
306, 603 |
SmlI
| C|TPyPuAG |
670, 757, 847, 967, 1019, 1031 |
SspI
| AAT|ATT |
1174 |
StuI
| AGG|CCT |
1319 |
Taqƒ¿I
| T|CGA |
252, 629, 857, 1030 |
TfiI
| G|A[AT]TC |
191, 395, 494, 624, 1115 |
TliI
| C|TCGAG |
1031 |
TseI
| G|C[AT]GC |
572 |
Tsp45I
| |GT[CG]AC |
1069, 1299 |
Tsp509I
| |AATT |
122, 506, 773, 1233, 1345 |
TspRI
| NNCA[CG]TGNN| |
1069, 1411 |
XhoI
| C|TCGAG |
1031 |
Click here to view TAIR data
>AT2G32460.1 length:1473
ATGGATGGTG GTGGAGAGAC GACGGCGACG GCTACGATGG AGGGGAGAGG | 50 |
GTTGAAGAAA GGGCCGTGGA CAACGACGGA GGATGCGATC TTGACGGAGT | 100 |
ACGTGAGAAA ACACGGTGAA GGTAATTGGA ACGCCGTGCA AAAGAACTCA | 150 |
GGTTTGCTCC GGTGTGGCAA AAGTTGCCGT CTACGGTGGG CGAATCATCT | 200 |
CCGGCCAAAT CTAAAGAAAG GATCTTTTAC TCCTGATGAA GAAAAGATCA | 250 |
TCATCGACCT TCACGCTAAG CTTGGAAACA AATGGGCTCG TATGGCTTCT | 300 |
CAGTTACCTG GAAGAACAGA CAATGAGATC AAGAACTATT GGAACACGAG | 350 |
GATGAAGAGA AGACAAAGAG CTGGTTTGCC TTTATACCCT CATGAGATTC | 400 |
AACATCAAGG GATTGATATT GATGATGAGT TTGAGTTTGA TTTAACTTCC | 450 |
TTTCAGTTCC AAAACCAAGA TCTTGATCAT AACCACCAAA ATATGATTCA | 500 |
GTACACTAAT TCTTCTAATA CTTCATCATC CTCGTCTTCA TTCTCTTCTT | 550 |
CATCTTCTCA ACCATCAAAA AGGCTGCGTC CTGATCCTTT AGTCTCTACT | 600 |
AATCCCGGCC TAAACCCGAT CCCCGATTCT TCGATGGATT TTCAAATGTT | 650 |
CTCTCTTTAC AACAATAGCC TTGAGAATGA CAATAACCAG TTTGGTTTCT | 700 |
CTGTTCCTTT GTCCTCATCA TCCTCGTCTA ACGAGGTGTG TAATCCCAAC | 750 |
CACATCCTTG AGTACATCTC CGAGAATTCG GACACAAGAA ATACCAATAA | 800 |
GAAAGACATT GATGCTATGA GTTATAGTTC ATTGCTTATG GGAGATCTTG | 850 |
AGATAAGATC GAGTTCTTTC CCTTTAGGAC TAGACAATAG CGTCCTAGAG | 900 |
CTTCCTTCAA ACCAAAGACC GACCCATTCG TTCAGTTCTA GTCCTATTAT | 950 |
TGACAATGGT GTCCATCTTG AGCCACCTTC TGGCAATAGT GGACTACTTG | 1000 |
ATGCCCTCTT GGAGGAGTCT CAAGCCTTGT CTCGAGGCGG ACTCTTCAAG | 1050 |
GACGTTAGGG TTTCCTCCAG TGACCTATGT GAGGTTCAAG ATAAAAGGGT | 1100 |
GAAGATGGAC TTTGAGAATC TTTTAATAGA TCATCTAAAC TCTTCTAATC | 1150 |
ATTCATCATT GGGAGCAAAC CCTAATATTC ACAACAAGTA CAATGAGCCA | 1200 |
ACAATGGTAA AAGTAACGGT GGATGATGAT GATGAATTAT TGACGAGCCT | 1250 |
TCTCAACAAC TTCCCTTCAA CCACAACACC TTTGCCTGAT TGGTATCGGG | 1300 |
TGACAGAAAT GCAAAACGAG GCCTCATATC TTGCCCCACC AAGTGGAATT | 1350 |
CTTATGGGAA ACCATCAAGG TAACGGCAGG GTGGAACCAC CCACGGTGCC | 1400 |
GCCTTCGTCC AGTGTAGATC CTATGGCCTC GTTGGGGTCA TGCTATTGGA | 1450 |
GCAACATGCC TAGCATCTGT TAG | 1500 |
>AT2G32460.1 longest ORF length:490
MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS | 50 |
GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS | 100 |
QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS | 150 |
FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST | 200 |
NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN | 250 |
HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE | 300 |
LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK | 350 |
DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP | 400 |
TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI | 450 |
LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC | 500 |
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