|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G32460 | ATMYB101, AtM1 | ARABIDOPSIS THALIANA MYB 1, myb domain protein 101 (.1.2) |
>AT2G32460.2 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, EagI, EarI, EciI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 143 |
| AciI | C|CGC | 1361 |
| AluI | AG|CT | 231, 331, 861 |
| ApoI | Pu|AATTPy | 738, 1310 |
| AvaI | C|PyCGPuG | 995 |
| BanI | G|GPyPuCC | 1359 |
| BanII | GPuGCPy|C | 248 |
| BclI | T|GATCA | 438 |
| BfaI | C|TAG | 842, 857, 900, 1422 |
| BglII | A|GATCT | 432, 807 |
| BlpI | GC|TNAGC | 230 |
| BsaAI | PyAC|GTPu | 64 |
| BsaBI | GATNN|NNATC | 214, 437, 1256 |
| BsaJI | C|CNNGG | 28, 1355 |
| BsaWI | [AT]|CCGG[AT] | 122 |
| BslI | CCNNNNN|NNGG | 942, 974, 1043, 1305, 1396 |
| BsoBI | C|PyCGPuG | 995 |
| Bsp1286I | G[GAT]GC[CAT]|C | 248 |
| BspHI | T|CATGA | 354 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 1359 |
| BssKI | |CCNGG | 270, 567 |
| BstAPI | GCANNNN|NTGC | 136 |
| BstF5I | GGATGNN| | 46, 315, 1186 |
| BstNI | CC|[AT]GG | 270 |
| BstYI | Pu|GATCPy | 184, 432, 807, 1380 |
| BtgI | C|CPuPyGG | 28, 1355 |
| DdeI | C|TNAG | 110, 229, 262 |
| DpnI | GA-CH3|TC | 49, 183, 208, 289, 431, 437, 545, 580, 806, 819, 1091, 1379 |
| DpnII | |GATC | 49, 183, 208, 289, 431, 437, 545, 580, 806, 819, 1091, 1379 |
| DraIII | CACNNN|GTG | 1304 |
| DrdI | GACNNNN|NNGTC | 853, 922 |
| EaeI | Py|GGCCPu | 166 |
| EcoNI | CCTNN|NNNAGG | 974, 1043 |
| EcoRI | G|AATTC | 738, 1310 |
| Fnu4HI | GC|NGC | 536, 1361 |
| HaeIII | GG|CC | 24, 165, 569, 1282, 1387 |
| HindIII | A|AGCTT | 232 |
| HinfI | G|ANTC | 155, 359, 458, 588, 978, 1003, 1079 |
| HpaII | C|CGG | 121, 163, 567 |
| Hpy188I | TCN|GA | 732, 741 |
| Hpy99I | CG[AT]CG| | 37 |
| HpyCH4III | ACN|GT | 76, 146, 1179, 1356 |
| HpyCH4IV | A|CGT | 63, 1014 |
| HpyCH4V | TG|CA | 99, 1272 |
| MboI | |GATC | 49, 183, 208, 289, 431, 437, 545, 580, 806, 819, 1091, 1379 |
| MseI | T|TAA | 404, 1085 |
| MslI | CAPyNN|NNPuTG | 313 |
| MspI | C|CGG | 121, 163, 567 |
| MwoI | GCNNNNN|NNGC | 136, 255, 1411 |
| N.BstNBI | GAGTCNNNN|N | 983 |
| NciI | CC|[CG]GG | 567 |
| NlaIII | CATG| | 353, 1401, 1417 |
| NlaIV | GGN|NCC | 1347, 1359 |
| NspI | PuCATG|Py | 1418 |
| PaeR7I | C|TCGAG | 995 |
| PflMI | CCANNNN|NTGG | 942, 1305 |
| PspGI | |CC[AT]GG | 270 |
| RsaI | GT|AC | 61, 463, 724, 1150 |
| Sau3AI | |GATC | 49, 183, 208, 289, 431, 437, 545, 580, 806, 819, 1091, 1379 |
| Sau96I | G|GNCC | 24 |
| ScrFI | CC|NGG | 270, 567 |
| SmlI | C|TPyPuAG | 634, 721, 811, 931, 983, 995 |
| SspI | AAT|ATT | 1138 |
| StuI | AGG|CCT | 1283 |
| Taqƒ¿I | T|CGA | 216, 593, 821, 994 |
| TfiI | G|A[AT]TC | 155, 359, 458, 588, 1079 |
| TliI | C|TCGAG | 995 |
| TseI | G|C[AT]GC | 536 |
| Tsp45I | |GT[CG]AC | 1033, 1263 |
| Tsp509I | |AATT | 86, 470, 737, 1197, 1309 |
| TspRI | NNCA[CG]TGNN| | 1033, 1375 |
| XhoI | C|TCGAG | 995 |
Click here to view TAIR data
>AT2G32460.2 length:1437
ATGGTGGGGA GAGGGTTGAA GAAAGGGCCG TGGACAACGA CGGAGGATGC | 50 |
GATCTTGACG GAGTACGTGA GAAAACACGG TGAAGGTAAT TGGAACGCCG | 100 |
TGCAAAAGAA CTCAGGTTTG CTCCGGTGTG GCAAAAGTTG CCGTCTACGG | 150 |
TGGGCGAATC ATCTCCGGCC AAATCTAAAG AAAGGATCTT TTACTCCTGA | 200 |
TGAAGAAAAG ATCATCATCG ACCTTCACGC TAAGCTTGGA AACAAATGGG | 250 |
CTCGTATGGC TTCTCAGTTA CCTGGAAGAA CAGACAATGA GATCAAGAAC | 300 |
TATTGGAACA CGAGGATGAA GAGAAGACAA AGAGCTGGTT TGCCTTTATA | 350 |
CCCTCATGAG ATTCAACATC AAGGGATTGA TATTGATGAT GAGTTTGAGT | 400 |
TTGATTTAAC TTCCTTTCAG TTCCAAAACC AAGATCTTGA TCATAACCAC | 450 |
CAAAATATGA TTCAGTACAC TAATTCTTCT AATACTTCAT CATCCTCGTC | 500 |
TTCATTCTCT TCTTCATCTT CTCAACCATC AAAAAGGCTG CGTCCTGATC | 550 |
CTTTAGTCTC TACTAATCCC GGCCTAAACC CGATCCCCGA TTCTTCGATG | 600 |
GATTTTCAAA TGTTCTCTCT TTACAACAAT AGCCTTGAGA ATGACAATAA | 650 |
CCAGTTTGGT TTCTCTGTTC CTTTGTCCTC ATCATCCTCG TCTAACGAGG | 700 |
TGTGTAATCC CAACCACATC CTTGAGTACA TCTCCGAGAA TTCGGACACA | 750 |
AGAAATACCA ATAAGAAAGA CATTGATGCT ATGAGTTATA GTTCATTGCT | 800 |
TATGGGAGAT CTTGAGATAA GATCGAGTTC TTTCCCTTTA GGACTAGACA | 850 |
ATAGCGTCCT AGAGCTTCCT TCAAACCAAA GACCGACCCA TTCGTTCAGT | 900 |
TCTAGTCCTA TTATTGACAA TGGTGTCCAT CTTGAGCCAC CTTCTGGCAA | 950 |
TAGTGGACTA CTTGATGCCC TCTTGGAGGA GTCTCAAGCC TTGTCTCGAG | 1000 |
GCGGACTCTT CAAGGACGTT AGGGTTTCCT CCAGTGACCT ATGTGAGGTT | 1050 |
CAAGATAAAA GGGTGAAGAT GGACTTTGAG AATCTTTTAA TAGATCATCT | 1100 |
AAACTCTTCT AATCATTCAT CATTGGGAGC AAACCCTAAT ATTCACAACA | 1150 |
AGTACAATGA GCCAACAATG GTAAAAGTAA CGGTGGATGA TGATGATGAA | 1200 |
TTATTGACGA GCCTTCTCAA CAACTTCCCT TCAACCACAA CACCTTTGCC | 1250 |
TGATTGGTAT CGGGTGACAG AAATGCAAAA CGAGGCCTCA TATCTTGCCC | 1300 |
CACCAAGTGG AATTCTTATG GGAAACCATC AAGGTAACGG CAGGGTGGAA | 1350 |
CCACCCACGG TGCCGCCTTC GTCCAGTGTA GATCCTATGG CCTCGTTGGG | 1400 |
GTCATGCTAT TGGAGCAACA TGCCTAGCAT CTGTTAG | 1450 |
>AT2G32460.2 longest ORF length:478
MVGRGLKKGP WTTTEDAILT EYVRKHGEGN WNAVQKNSGL LRCGKSCRLR | 50 |
WANHLRPNLK KGSFTPDEEK IIIDLHAKLG NKWARMASQL PGRTDNEIKN | 100 |
YWNTRMKRRQ RAGLPLYPHE IQHQGIDIDD EFEFDLTSFQ FQNQDLDHNH | 150 |
QNMIQYTNSS NTSSSSSSFS SSSSQPSKRL RPDPLVSTNP GLNPIPDSSM | 200 |
DFQMFSLYNN SLENDNNQFG FSVPLSSSSS SNEVCNPNHI LEYISENSDT | 250 |
RNTNKKDIDA MSYSSLLMGD LEIRSSSFPL GLDNSVLELP SNQRPTHSFS | 300 |
SSPIIDNGVH LEPPSGNSGL LDALLEESQA LSRGGLFKDV RVSSSDLCEV | 350 |
QDKRVKMDFE NLLIDHLNSS NHSSLGANPN IHNKYNEPTM VKVTVDDDDE | 400 |
LLTSLLNNFP STTTPLPDWY RVTEMQNEAS YLAPPSGILM GNHQGNGRVE | 450 |
PPTVPPSSSV DPMASLGSCY WSNMPSIC | 500 |