fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G34710 ATHB14, PHB-1D, ATHB-14, PHB PHABULOSA 1D, PHABULOSA, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 14, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1)

>AT2G34710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 1882
BglII A|GATCT 2163
HindIII A|AGCTT 1374
PstI CTGCA|G 642
PvuII CAG|CTG 417
StyI C|C[AT][AT]GG 551, 1400
XhoI C|TCGAG 109


Click here to view TAIR data

>AT2G34710.1 length:2559
ATGATGATGG TCCATTCGAT GAGCAGAGAT ATGATGAACA GAGAGTCGCC 
50
GGATAAAGGG TTAGATTCCG GCAAGTATGT GAGGTACACG CCGGAGCAAG 
100
TGGAAGCTCT CGAGAGAGTT TACACTGAGT GTCCTAAGCC AAGTTCTCTA 
150
AGAAGACAAC AACTCATACG TGAATGTCCG ATTCTCTCTA ACATCGAGCC 
200
TAAGCAGATC AAAGTTTGGT TTCAGAACCG CAGATGTCGT GAGAAGCAGA 
250
GGAAAGAAGC TGCTCGTCTT CAAACAGTGA ACAGAAAACT CAATGCCATG 
300
AACAAACTCT TGATGGAAGA GAATGATCGT TTGCAGAAGC AAGTTTCTAA 
350
CTTGGTCTAT GAGAATGGCC ACATGAAACA TCAACTTCAC ACTGCTTCTG 
400
GGACGACCAC AGACAACAGC TGTGAGTCTG TGGTCGTGAG TGGTCAGCAA 
450
CATCAACAGC AAAACCCAAA TCCTCAGCAT CAGCAACGTG ATGCTAACAA 
500
CCCAGCAGGA CTCCTTTCTA TAGCAGAGGA GGCCCTAGCA GAGTTCCTTT 
550
CCAAGGCTAC AGGAACTGCT GTTGACTGGG TTCAGATGAT TGGGATGAAG 
600
CCTGGTCCGG ATTCTATTGG CATAGTCGCT ATTTCGCGCA ACTGCAGCGG 
650
AATTGCAGCA CGTGCCTGCG GCCTCGTGAG TTTAGAACCC ATGAAGGTTG 
700
CTGAAATTCT CAAAGATCGT CCATCTTGGC TCCGAGATTG TCGAAGTGTG 
750
GATACTCTGA GTGTGATACC TGCTGGAAAC GGTGGGACGA TCGAGCTTAT 
800
TTACACGCAG ATGTATGCTC CTACGACTTT AGCAGCAGCT CGTGACTTTT 
850
GGACGCTGAG ATATAGCACA TGTTTGGAAG ATGGAAGCTA TGTGGTTTGT 
900
GAAAGGTCGC TTACTTCTGC AACTGGTGGC CCCACTGGGC CACCTTCTTC 
950
AAACTTTGTG AGAGCTGAAA TGAAACCAAG CGGGTTTCTC ATCCGTCCTT 
1000
GCGATGGTGG TGGTTCCATT CTCCACATTG TTGATCATGT TGATCTGGAT 
1050
GCCTGGAGTG TCCCTGAAGT CATGAGGCCT CTCTATGAAT CATCGAAGAT 
1100
TCTTGCTCAG AAAATGACTG TTGCTGCTTT GAGACATGTA AGACAAATTG 
1150
CACAAGAAAC AAGTGGAGAA GTTCAGTATG GTGGAGGGCG CCAACCTGCG 
1200
GTTTTAAGAA CCTTCAGTCA AAGACTCTGT CGGGGTTTCA ATGATGCTGT 
1250
TAATGGTTTT GTGGATGATG GATGGTCACC AATGGGTAGC GATGGTGCAG 
1300
AGGATGTTAC TGTAATGATA AACTTGTCCC CTGGGAAGTT TGGTGGGTCT 
1350
CAGTACGGTA ATTCATTCCT TCCAAGCTTT GGTAGTGGCG TGCTTTGTGC 
1400
CAAGGCATCT ATGTTGCTTC AGAACGTTCC ACCCGCTGTG CTGGTTCGAT 
1450
TCCTTAGAGA ACACCGATCT GAATGGGCTG ATTATGGCGT GGATGCTTAT 
1500
GCTGCTGCAT CGCTCAGAGC AAGTCCTTTT GCTGTTCCTT GTGCTAGAGC 
1550
TGGGGGGTTC CCAAGTAACC AAGTCATTCT TCCTCTTGCG CAGACAGTTG 
1600
AACATGAAGA GTCACTTGAG GTGGTTAGAC TTGAAGGTCA CGCTTACTCA 
1650
CCCGAAGACA TGGGTTTAGC TCGGGATATG TATTTGCTAC AGCTTTGTAG 
1700
CGGTGTTGAT GAAAATGTGG TTGGAGGTTG TGCACAGCTT GTATTTGCCC 
1750
CTATCGATGA ATCATTTGCT GATGATGCAC CTTTGCTTCC TTCCGGTTTC 
1800
CGCATCATAC CTCTTGAACA GAAATCTACT CCGAACGGTG CATCTGCAAA 
1850
CCGTACCCTG GATTTAGCCT CAGCTTTAGA AGGATCCACA CGTCAAGCTG 
1900
GTGAAGCCGA CCCAAATGGC TGTAACTTTA GGTCGGTACT AACCATAGCA 
1950
TTCCAGTTCA CATTTGATAA CCATTCAAGA GACAGTGTTG CTTCAATGGC 
2000
ACGTCAGTAC GTGCGAAGCA TAGTAGGATC GATTCAGAGG GTTGCTCTAG 
2050
CCATTGCTCC TCGTCCTGGC TCCAATATCA GTCCAATATC TGTTCCCACT 
2100
TCCCCTGAAG CTCTCACTCT GGTCCGTTGG ATCTCCCGGA GTTACAGCCT 
2150
TCACACTGGT GCAGATCTCT TTGGATCTGA TTCTCAAACC AGTGGTGACA 
2200
CGTTGCTGCA TCAACTCTGG AATCACTCTG ATGCAATCTT GTGCTGCTCC 
2250
CTCAAAACAA ACGCTTCACC GGTTTTCACA TTCGCAAACC AAACCGGTTT 
2300
AGACATGCTG GAAACGACTC TTGTAGCCCT TCAAGACATA ATGCTAGACA 
2350
AGACCCTTGA CGAACCTGGT CGTAAAGCTC TTTGCTCTGA GTTCCCCAAG 
2400
ATCATGCAAC AGGGCTATGC TCATCTGCCG GCAGGAGTAT GTGCGTCAAG 
2450
CATGGGAAGG ATGGTATCTT ACGAGCAGGC AACGGTGTGG AAAGTTCTTG 
2500
AAGACGATGA ATCAAACCAC TGCTTAGCTT TCATGTTCGT GAATTGGTCG 
2550
TTCGTTTGA
2600

>AT2G34710.1 longest ORF length:852
MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL 
50
RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM 
100
NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ 
150
HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK 
200
PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV 
250
DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC 
300
ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD 
350
AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA 
400
VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS 
450
QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY 
500
AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS 
550
PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF 
600
RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA 
650
FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT 
700
SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS 
750
LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK 
800
IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS 
850
FV
900