fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G34710 (ATHB14, PHB-1D, ATHB-14, PHB)

Alias ATHB14, PHB-1D, ATHB-14, PHB
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / REVOLUTA/INTERFASCICULAR FIBERLESS1
AtTFDBHomeobox / HD-Zip III
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description PHABULOSA 1D, PHABULOSA, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 14, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1)
TAIR annotation Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA. (.1)
Gene model
Gene model cDNA support
AT2G34710.1 28
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10014: other biological processes ->meristem initiation
(P) 10072: developmental processes ->primary shoot apical meristem specification
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 80060: developmental processes ->integument development
(F) 8289: other binding ->lipid binding
(P) 9855: developmental processes ->determination of bilateral symmetry
(P) 9944: developmental processes ->polarity specification of adaxial/abaxial axis
(P) 9955: developmental processes ->adaxial/abaxial pattern specification
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR165a: 3'-CCCCCTACTTCGGACCAGGCT-5'
5'--3'

miR165b: 3'-CCCCCTACTTCGGACCAGGCT-5'
5'--3'

miR166a: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166b: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166c: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166d: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166e: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166f: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'

miR166g: 3'-CCCCTTACTTCGGACCAGGCT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1 7 9
soybean 1 4 10 15
rice 1 2 3 6
sorghum 1 1 3 5
physcomitrella 4 1 5
Total 4 12 24 40
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
AVNSDELNLALAHYAT at 102/1010 in physcomitrella Pp014242 (Type II)
VLRSYRLHLGLDLTRS at 876/1010 in physcomitrella Pp014242 (Type II)
QSYHYHLGLELLNQSD at 709/980 in sorghum Sb022478 (Type III)
GAHARQLDLHLTLRVS at 851/940 in sorghum Sb031905 (Type II)
VLSSYRLHLALDLTRP at 746/880 in physcomitrella Pp026644 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        

         bushy (direct input), 
         loss of apical dominance (direct input)


        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         dark green leaf 
         (A20273-77)
         

         
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID88
           Pharbitis
           35S:AtCDS-SRDX
           2006-04-20
            
           separated petal, small flower and small leaf 
[Publication link]		
           and more...
          

          

           ID50078
           Torenia
           35S:AtCDS-SRDX
           2008-10-01
           development bulk, 5 of 7 lines 
           enlarged blotch size 
[Publication link]		
           
          

         

         

          Comment