Locus |
Common name |
Short description |
AT2G37630 |
AtPHAN, AtMYB91, MYB91, AS1 |
ARABIDOPSIS PHANTASTICA-LIKE 1, MYB DOMAIN PROTEIN 91, ASYMMETRIC LEAVES 1, myb-like HTH transcriptional regulator family protein (.1) |
>AT2G37630.1 CDS map
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Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AfeI, AgeI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, SwaI, Tth111I, XbaI, XcmI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
875 |
AciI
| C|CGC |
444, 530, 635, 1093 |
AclI
| AA|CGTT |
14, 427 |
AflII
| C|TTAAG |
157 |
AflIII
| A|CPuPyGT |
871 |
AhdI
| GACNNN|NNGTC |
126 |
AluI
| AG|CT |
405, 541, 622, 756, 796, 846, 852, 916, 975 |
AlwNI
| CAGNNN|CTG |
617, 1018 |
AvaI
| C|PyCGPuG |
265, 388 |
AvaII
| G|G[AT]CC |
66, 684, 1033 |
BanI
| G|GPyPuCC |
791 |
BclI
| T|GATCA |
1026 |
BfaI
| C|TAG |
854, 1038 |
BsaAI
| PyAC|GTPu |
44 |
BsaHI
| GPu|CGPyC |
121 |
BsaJI
| C|CNNGG |
163, 265, 535, 584, 646, 688 |
BsiEI
| CGPuPy|CG |
378 |
BslI
| CCNNNNN|NNGG |
218, 800, 1019 |
BsoBI
| C|PyCGPuG |
265, 388 |
Bsp1286I
| G[GAT]GC[CAT]|C |
790 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
791 |
BsrBI
| GAG|CGG |
418 |
BsrDI
| GCAATGNN| |
945 |
BsrI
| ACTGGN| |
1020 |
BssKI
| |CCNGG |
162, 264, 687 |
BstBI
| TT|CGAA |
474 |
BstNI
| CC|[AT]GG |
162, 687 |
BstXI
| CCANNNNN|NTGG |
646 |
BtgI
| C|CPuPyGG |
646 |
DdeI
| C|TNAG |
91, 256, 400, 667, 834, 921 |
DpnI
| GA-CH3|TC |
166, 208, 377, 526, 952, 1025 |
DpnII
| |GATC |
166, 208, 377, 526, 952, 1025 |
DrdI
| GACNNNN|NNGTC |
65 |
Fnu4HI
| GC|NGC |
252, 438, 444, 450, 618, 624, 650, 656, 822, 848 |
HaeIII
| GG|CC |
576, 1003 |
HhaI
| GCG|C |
626 |
HinP1I
| G|CGC |
626 |
HindIII
| A|AGCTT |
406 |
HinfI
| G|ANTC |
383, 858, 1051 |
HpaII
| C|CGG |
264 |
Hpy188I
| TCN|GA |
68, 90, 380, 495, 753, 861, 1048 |
HpyCH4III
| ACN|GT |
59, 115, 456, 612, 682 |
HpyCH4IV
| A|CGT |
13, 43, 51, 426, 869 |
HpyCH4V
| TG|CA |
34, 451, 571, 619, 651, 823, 849, 1082 |
MboI
| |GATC |
166, 208, 377, 526, 952, 1025 |
MseI
| T|TAA |
156, 306 |
MspA1I
| C[AC]G|C[GT]G |
446, 623 |
MspI
| C|CGG |
264 |
MwoI
| GCNNNNN|NNGC |
444, 624, 635, 656, 839 |
N.BstNBI
| GAGTCNNNN|N |
863 |
NciI
| CC|[CG]GG |
264 |
NlaIII
| CATG| |
825 |
NlaIV
| GGN|NCC |
261, 791 |
NsiI
| ATGCA|T |
35 |
PaeR7I
| C|TCGAG |
388 |
PflMI
| CCANNNN|NTGG |
1019 |
PspGI
| |CC[AT]GG |
162, 687 |
PstI
| CTGCA|G |
620, 652, 850 |
PvuI
| CGAT|CG |
378 |
PvuII
| CAG|CTG |
623 |
RsaI
| GT|AC |
373, 964 |
RsrII
| CG|G[AT]CCG |
67 |
Sau3AI
| |GATC |
166, 208, 377, 526, 952, 1025 |
Sau96I
| G|GNCC |
66, 684, 1033 |
ScrFI
| CC|NGG |
162, 264, 687 |
SfcI
| C|TPuPyAG |
620, 652, 850 |
SmaI
| CCC|GGG |
265 |
SmlI
| C|TPyPuAG |
157, 388 |
StuI
| AGG|CCT |
577 |
StyI
| C|C[AT][AT]GG |
535 |
Taqƒ¿I
| T|CGA |
387, 473, 954 |
TfiI
| G|A[AT]TC |
383 |
TliI
| C|TCGAG |
388 |
TseI
| G|C[AT]GC |
252, 438, 447, 618, 624, 650, 656, 822, 848 |
Tsp45I
| |GT[CG]AC |
118 |
Tsp509I
| |AATT |
149, 470 |
TspRI
| NNCA[CG]TGNN| |
525, 615 |
XhoI
| C|TCGAG |
388 |
XmaI
| C|CCGGG |
265 |
Click here to view TAIR data
>AT2G37630.1 length:1104
ATGAAAGAGA GACAACGTTG GAGTGGTGAA GAAGATGCAT TGTTACGTGC | 50 |
TTACGTTAGA CAGTTCGGTC CGAGAGAATG GCATCTTGTG TCTGAGCGTA | 100 |
TGAACAAACC TTTGAACCGT GACGCCAAGT CTTGTTTAGA GAGATGGAAG | 150 |
AATTATCTTA AGCCAGGGAT CAAGAAAGGG TCTTTGACAG AGGAAGAGCA | 200 |
GAGGCTTGTG ATCCGTCTTC AGGAGAAACA CGGCAACAAG TGGAAGAAGA | 250 |
TTGCTGCTGA GGTTCCCGGG AGGACGGCAA AGCGGTTAGG GAAGTGGTGG | 300 |
GAAGTGTTTA AGGAGAAGCA ACAGAGAGAA GAGAAAGAGA GTAACAAGAG | 350 |
AGTTGAGCCT ATTGACGAGA GTAAGTACGA TCGGATTCTC GAGAGTTTCG | 400 |
CTGAGAAGCT TGTCAAAGAG CGGTCTAACG TTGTCCCTGC TGCTGCCGCT | 450 |
GCTGCAACGG TTGTGATGGC TAATTCGAAT GGAGGGTTTT TACATTCTGA | 500 |
ACAACAAGTT CAGCCTCCTA ACCCAGTGAT CCCGCCTTGG TTAGCTACTT | 550 |
CTAACAATGG GAACAATGTT GTTGCAAGGC CTCCCTCGGT AACTTTGACA | 600 |
TTATCGCCTT CCACAGTGGC TGCAGCTGCG CCTCAACCGC CAATCCCGTG | 650 |
GCTGCAGCAG CAACAGCCTG AGAGAGCAGA GAACGGTCCA GGGGGACTTG | 700 |
TGTTAGGGAG TATGATGCCG TCTTGTAGTG GGAGTAGCGA GAGTGTGTTC | 750 |
TTGTCAGAGC TTGTGGAGTG TTGTAGAGAG TTGGAGGAAG GGCACCGAGC | 800 |
TTGGGCAGAC CATAAGAAAG AGGCTGCATG GAGGCTAAGA AGGCTGGAGC | 850 |
TGCAGCTAGA GTCAGAGAAG ACGTGTAGAC AAAGGGAGAA GATGGAGGAG | 900 |
ATTGAGGCAA AGATGAAAGC TCTTAGGGAA GAGCAGAAGA ACGCAATGGA | 950 |
GAAGATCGAA GGAGAGTACA GAGAACAGCT CGTTGGTTTG AGGCGAGACG | 1000 |
CAGAGGCCAA AGACCAGAAA CTGGCTGATC AATGGACCTC TAGGCATATC | 1050 |
AGACTCACCA AGTTTCTTGA ACAACAAATG GGTTGCAGAT TAGACCGCCC | 1100 |
CTGA | 1150 |
>AT2G37630.1 longest ORF length:367
MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK | 50 |
NYLKPGIKKG SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW | 100 |
EVFKEKQQRE EKESNKRVEP IDESKYDRIL ESFAEKLVKE RSNVVPAAAA | 150 |
AATVVMANSN GGFLHSEQQV QPPNPVIPPW LATSNNGNNV VARPPSVTLT | 200 |
LSPSTVAAAA PQPPIPWLQQ QQPERAENGP GGLVLGSMMP SCSGSSESVF | 250 |
LSELVECCRE LEEGHRAWAD HKKEAAWRLR RLELQLESEK TCRQREKMEE | 300 |
IEAKMKALRE EQKNAMEKIE GEYREQLVGL RRDAEAKDQK LADQWTSRHI | 350 |
RLTKFLEQQM GCRLDRP | 400 |
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