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| Locus | Common name | Short description |
| AT2G42830 | AGL5, SHP2 | SHATTERPROOF 2, AGAMOUS-like 5, K-box region and MADS-box transcription factor family protein (.1.2) |
>AT2G42830.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 572 |
| AccIII(BspMII) | T|CCGGA | 335 |
| AciI | C|CGC | 544 |
| AflIII | A|CPuPyGT | 536 |
| AluI | AG|CT | 136, 144, 256, 295, 519 |
| ApoI | Pu|AATTPy | 360, 699 |
| AvaI | C|PyCGPuG | 194 |
| BanII | GPuGCPy|C | 145 |
| BsaHI | GPu|CGPyC | 268, 324 |
| BsaWI | [AT]|CCGG[AT] | 335, 659 |
| BsiHKAI | G[AT]GC[AT]|C | 145 |
| BsoBI | C|PyCGPuG | 194 |
| Bsp1286I | G[GAT]GC[CAT]|C | 145 |
| BspEI | T|CCGGA | 335 |
| BsrDI | GCAATGNN| | 121 |
| Cac8I | GCN|NGC | 259 |
| DdeI | C|TNAG | 166, 304 |
| DpnI | GA-CH3|TC | 459 |
| DpnII | |GATC | 459 |
| EcoRI | G|AATTC | 699 |
| Fnu4HI | GC|NGC | 34, 521 |
| HaeIII | GG|CC | 197 |
| HincII | GTPy|PuAC | 274, 676 |
| HindIII | A|AGCTT | 137, 257 |
| HinfI | G|ANTC | 89, 344, 384, 445, 585, 618, 692 |
| HpaI | GTT|AAC | 274, 676 |
| HpaII | C|CGG | 334, 658 |
| Hpy188I | TCN|GA | 264, 281, 356, 457, 695 |
| Hpy99I | CG[AT]CG| | 114, 266 |
| HpyCH4III | ACN|GT | 223, 609 |
| HpyCH4V | TG|CA | 107, 484, 501, 522, 726 |
| MboI | |GATC | 459 |
| MseI | T|TAA | 273, 405, 675 |
| MspI | C|CGG | 334, 658 |
| MwoI | GCNNNNN|NNGC | 115, 171 |
| N.BstNBI | GAGTCNNNN|N | 623 |
| NlaIII | CATG| | 499, 535 |
| NlaIV | GGN|NCC | 394 |
| NspI | PuCATG|Py | 500, 536 |
| PaeR7I | C|TCGAG | 194 |
| PciI | A|CATGT | 536 |
| RsaI | GT|AC | 211, 247, 307 |
| SacI | GAGCT|C | 145 |
| Sau3AI | |GATC | 459 |
| ScaI | AGT|ACT | 308 |
| SfcI | C|TPuPyAG | 574 |
| SmlI | C|TPyPuAG | 130, 194, 415, 436 |
| Taqƒ¿I | T|CGA | 193, 516, 587 |
| TfiI | G|A[AT]TC | 89, 344, 384, 445, 585, 692 |
| TliI | C|TCGAG | 194 |
| TseI | G|C[AT]GC | 34, 521 |
| Tsp45I | |GT[CG]AC | 99, 160 |
| Tsp509I | |AATT | 359, 662, 698 |
| TspRI | NNCA[CG]TGNN| | 226 |
| XhoI | C|TCGAG | 194 |
Click here to view TAIR data
>AT2G42830.1 length:741
ATGGAGGGTG GTGCGAGTAA TGAAGTAGCA GAGAGCAGCA AGAAGATAGG | 50 |
GAGAGGGAAG ATAGAGATAA AGAGGATAGA GAACACTACG AATCGTCAAG | 100 |
TCACTTTCTG CAAACGACGC AATGGTTTAC TCAAGAAAGC TTATGAGCTC | 150 |
TCTGTCTTGT GTGACGCTGA GGTTGCTCTT GTCATCTTCT CCACTCGAGG | 200 |
CCGTCTCTAC GAGTACGCCA ACAACAGTGT GAGAGGAACA ATAGAAAGGT | 250 |
ACAAGAAAGC TTGCTCCGAC GCCGTTAACC CTCCGACCAT CACCGAAGCT | 300 |
AATACTCAGT ACTATCAGCA AGAGGCGTCT AAACTCCGGA GACAGATTCG | 350 |
GGACATTCAG AATTTGAACA GACACATTCT TGGTGAATCT CTTGGTTCCT | 400 |
TGAACTTTAA GGAACTCAAG AACCTTGAAA GTAGGCTTGA GAAAGGAATC | 450 |
AGTCGTGTCC GATCCAAGAA GCACGAGATG TTAGTTGCAG AGATTGAATA | 500 |
CATGCAAAAA AGGGAAATCG AGCTGCAAAA CGATAACATG TATCTCCGCT | 550 |
CCAAGATTAC TGAAAGAACA GGTCTACAGC AACAAGAATC GAGTGTGATA | 600 |
CATCAAGGGA CAGTTTACGA GTCGGGTGTT ACTTCTTCTC ACCAGTCGGG | 650 |
GCAGTATAAC CGGAATTATA TTGCGGTTAA CCTTCTTGAA CCGAATCAGA | 700 |
ATTCCTCCAA CCAAGACCAA CCACCTCTGC AACTTGTTTG A | 750 |
>AT2G42830.1 longest ORF length:246
MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL | 50 |
SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA | 100 |
NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI | 150 |
SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI | 200 |
HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV | 250 |