Locus |
Common name |
Short description |
AT2G45190 |
FIL, YAB1, AFO |
YABBY1, FILAMENTOUS FLOWER, ABNORMAL FLORAL ORGANS, Plant-specific transcription factor YABBY family protein (.1) |
>AT2G45190.1 CDS map
>>Show genomic map
Uncut enzymes: AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
ApaI
| GGGCC|C |
536 |
HindIII
| A|AGCTT |
132 |
HpaI
| GTT|AAC |
400 |
NdeI
| CA|TATG |
200 |
PstI
| CTGCA|G |
656 |
PvuII
| CAG|CTG |
32, 659 |
Click here to view TAIR data
>AT2G45190.1 length:690
ATGTCTATGT CGTCTATGTC CTCCCCTTCC TCAGCTGTTT GTTCACCGGA | 50 |
CCACTTCTCT CCTTCCGACC ATCTCTGCTA TGTCCAATGC AACTTTTGCC | 100 |
AAACCATCCT TGCGGTTAAT GTTCCTTACA CAAGCTTGTT CAAGACCGTA | 150 |
ACTGTCCGAT GTGGTTGCTG TACCAATCTC CTTTCGGTGA ACATGAGATC | 200 |
ATATGTCCTC CCAGCTTCTA ACCAGCTCCA GCTCCAGCTC GGTCCTCACT | 250 |
CTTACTTCAA TCCCCAGGAT ATTCTGGAGG AGCTGAGAGA TGCACCGTCT | 300 |
AACATGAATA TGATGATGAT GAATCAACAT CCTACTATGA ATGACATACC | 350 |
ATCTTTCATG GATCTTCATC AACAACATGA GATTCCTAAA GCACCACCCG | 400 |
TTAACCGCCC TCCAGAGAAA AGACAGAGAG TCCCATCCGC ATATAACCGA | 450 |
TTCATCAAGG AGGAGATCCA ACGTATCAAA GCTGGTAATC CTGATATAAG | 500 |
CCACAGAGAA GCCTTTAGTG CTGCTGCCAA GAATTGGGCC CACTTCCCCC | 550 |
ACATACACTT CGGGCTCGTG CCAGACAATC AACCCGTGAA GAAAACCAAC | 600 |
ATGCCCCAAC AGGAGGGAGA GGATAACATG GTGATGAAAG AAGGGTTCTA | 650 |
CGCTCCTGCA GCTGCTAACG TTGGTGTGAC TCCTTATTAA | 700 |
>AT2G45190.1 longest ORF length:229
MSMSSMSSPS SAVCSPDHFS PSDHLCYVQC NFCQTILAVN VPYTSLFKTV | 50 |
TVRCGCCTNL LSVNMRSYVL PASNQLQLQL GPHSYFNPQD ILEELRDAPS | 100 |
NMNMMMMNQH PTMNDIPSFM DLHQQHEIPK APPVNRPPEK RQRVPSAYNR | 150 |
FIKEEIQRIK AGNPDISHRE AFSAAAKNWA HFPHIHFGLV PDNQPVKKTN | 200 |
MPQQEGEDNM VMKEGFYAPA AANVGVTPY | 250 |
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