fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45190 FIL, YAB1, AFO YABBY1, FILAMENTOUS FLOWER, ABNORMAL FLORAL ORGANS, Plant-specific transcription factor YABBY family protein (.1)

>AT2G45190.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 536
HindIII A|AGCTT 132
HpaI GTT|AAC 400
NdeI CA|TATG 200
PstI CTGCA|G 656
PvuII CAG|CTG 32, 659


Click here to view TAIR data

>AT2G45190.1 length:690
ATGTCTATGT CGTCTATGTC CTCCCCTTCC TCAGCTGTTT GTTCACCGGA 
50
CCACTTCTCT CCTTCCGACC ATCTCTGCTA TGTCCAATGC AACTTTTGCC 
100
AAACCATCCT TGCGGTTAAT GTTCCTTACA CAAGCTTGTT CAAGACCGTA 
150
ACTGTCCGAT GTGGTTGCTG TACCAATCTC CTTTCGGTGA ACATGAGATC 
200
ATATGTCCTC CCAGCTTCTA ACCAGCTCCA GCTCCAGCTC GGTCCTCACT 
250
CTTACTTCAA TCCCCAGGAT ATTCTGGAGG AGCTGAGAGA TGCACCGTCT 
300
AACATGAATA TGATGATGAT GAATCAACAT CCTACTATGA ATGACATACC 
350
ATCTTTCATG GATCTTCATC AACAACATGA GATTCCTAAA GCACCACCCG 
400
TTAACCGCCC TCCAGAGAAA AGACAGAGAG TCCCATCCGC ATATAACCGA 
450
TTCATCAAGG AGGAGATCCA ACGTATCAAA GCTGGTAATC CTGATATAAG 
500
CCACAGAGAA GCCTTTAGTG CTGCTGCCAA GAATTGGGCC CACTTCCCCC 
550
ACATACACTT CGGGCTCGTG CCAGACAATC AACCCGTGAA GAAAACCAAC 
600
ATGCCCCAAC AGGAGGGAGA GGATAACATG GTGATGAAAG AAGGGTTCTA 
650
CGCTCCTGCA GCTGCTAACG TTGGTGTGAC TCCTTATTAA 
700

>AT2G45190.1 longest ORF length:229
MSMSSMSSPS SAVCSPDHFS PSDHLCYVQC NFCQTILAVN VPYTSLFKTV 
50
TVRCGCCTNL LSVNMRSYVL PASNQLQLQL GPHSYFNPQD ILEELRDAPS 
100
NMNMMMMNQH PTMNDIPSFM DLHQQHEIPK APPVNRPPEK RQRVPSAYNR 
150
FIKEEIQRIK AGNPDISHRE AFSAAAKNWA HFPHIHFGLV PDNQPVKKTN 
200
MPQQEGEDNM VMKEGFYAPA AANVGVTPY
250