Locus |
Common name |
Short description |
AT3G02310 |
AGL4, SEP2 |
SEPALLATA 2, AGAMOUS-like 4, K-box region and MADS-box transcription factor family protein (.1) |
>AT3G02310.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
360 |
HindIII
| A|AGCTT |
92 |
PstI
| CTGCA|G |
171 |
SacI
| GAGCT|C |
19 |
Click here to view TAIR data
>AT3G02310.1 length:753
ATGGGAAGAG GAAGAGTAGA GCTCAAGAGG ATAGAGAACA AAATCAACAG | 50 |
ACAAGTGACG TTTGCTAAAC GTAGAAATGG TTTGCTGAAA AAAGCTTATG | 100 |
AGCTTTCTGT TCTCTGCGAT GCTGAAGTCT CTCTCATCGT CTTCTCCAAC | 150 |
CGTGGCAAGC TCTACGAGTT CTGCAGCACC TCCAACATGC TCAAGACACT | 200 |
GGAAAGGTAT CAGAAGTGTA GCTATGGCTC CATTGAAGTC AACAACAAAC | 250 |
CTGCTAAAGA GCTTGAGAAC AGCTACAGAG AGTACTTGAA GCTGAAAGGT | 300 |
AGATATGAAA ATCTGCAACG TCAGCAGAGA AATCTTCTTG GAGAGGATCT | 350 |
TGGACCTCTG AATTCAAAGG AGCTAGAGCA GCTTGAGCGT CAACTAGACG | 400 |
GCTCTCTGAA GCAAGTTCGC TGCATCAAGA CACAGTATAT GCTTGACCAG | 450 |
CTCTCTGATC TTCAAGGTAA GGAGCATATC TTGCTTGATG CCAACAGAGC | 500 |
TTTGTCAATG AAGCTGGAAG ATATGATCGG CGTGAGACAT CACCATATAG | 550 |
GAGGAGGATG GGAAGGTGGT GATCAACAGA ATATTGCCTA TGGACATCCT | 600 |
CAGGCTCATT CTCAGGGACT ATACCAATCT CTTGAATGTG ATCCCACTTT | 650 |
GCAAATTGGA TATAGCCATC CAGTGTGCTC AGAGCAAATG GCTGTGACGG | 700 |
TGCAAGGTCA GTCCCAACAA GGAAACGGCT ACATCCCTGG CTGGATGCTG | 750 |
TGA | 800 |
>AT3G02310.1 longest ORF length:250
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIVFSN | 50 |
RGKLYEFCST SNMLKTLERY QKCSYGSIEV NNKPAKELEN SYREYLKLKG | 100 |
RYENLQRQQR NLLGEDLGPL NSKELEQLER QLDGSLKQVR CIKTQYMLDQ | 150 |
LSDLQGKEHI LLDANRALSM KLEDMIGVRH HHIGGGWEGG DQQNIAYGHP | 200 |
QAHSQGLYQS LECDPTLQIG YSHPVCSEQM AVTVQGQSQQ GNGYIPGWML | 250 |
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