fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G15030 TCP4, MEE35 maternal effect embryo arrest 35, TCP family transcription factor 4 (.1.2.3)

>AT3G15030.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 672
EcoRI G|AATTC 835, 1153
SacI GAGCT|C 304
SpeI A|CTAGT 855


Click here to view TAIR data

>AT3G15030.1 length:1263
ATGTCTGACG ACCAATTCCA TCACCCGCCG CCTCCTTCTT CAATGAGGCA 
50
CCGTTCTACG TCGGATGCGG CGGACGGCGG CTGCGGCGAG ATTGTTGAGG 
100
TGCAAGGTGG TCACATTGTT CGGTCTACCG GAAGAAAAGA CCGCCACAGC 
150
AAAGTCTGCA CGGCTAAAGG GCCACGTGAC CGGCGCGTGA GACTCTCTGC 
200
TCACACGGCG ATTCAGTTTT ACGATGTTCA AGACAGGCTT GGTTTCGACC 
250
GACCTAGCAA AGCCGTTGAT TGGCTTATCA AAAAGGCTAA GACTTCCATT 
300
GACGAGCTCG CTGAGCTTCC TCCCTGGAAT CCCGCCGATG CAATTCGCCT 
350
AGCCGCTGCT AACGCTAAAC CCAGAAGAAC CACCGCCAAA ACCCAAATCT 
400
CTCCGTCTCC GCCACCGCCG CAACAGCAAC AACAACAACA ACAGCTTCAG 
450
TTCGGTGTTG GCTTCAACGG AGGAGGAGCA GAGCATCCGA GTAACAACGA 
500
GTCGAGTTTT CTCCCGCCGT CAATGGATTC AGATTCGATA GCTGACACTA 
550
TAAAGTCGTT TTTTCCGGTG ATTGGCTCTT CAACGGAGGC TCCTTCGAAT 
600
CATAACCTTA TGCACAACTA TCATCATCAG CATCCGCCGG ATTTGCTTTC 
650
TCGAACTAAT AGCCAAAACC AAGATCTCCG TCTCTCGCTG CAATCGTTCC 
700
CGGATGGTCC ACCGTCGCTT CTGCACCACC AACATCACCA CCACACCTCT 
750
GCTTCCGCCT CCGAGCCTAC TCTGTTCTAC GGACAGAGCA ATCCGTTAGG 
800
GTTTGACACA TCGAGTTGGG AGCAGCAGTC GTCGGAATTC GGAAGGATTC 
850
AGAGACTAGT GGCTTGGAAC AGCGGCGGTG GCGGCGGAGC AACCGATACA 
900
GGAAACGGAG GAGGGTTTCT GTTCGCTCCT CCTACTCCTT CAACGACGTC 
950
GTTTCAGCCA GTTCTTGGCC AAAGCCAACA GCTTTATTCT CAGAGGGGTC 
1000
CCCTTCAGTC CAGTTACAGT CCCATGATCC GTGCTTGGTT TGATCCTCAC 
1050
CATCATCACC AATCCATCTC CACCGACGAT CTCAACCACC ACCATCACCT 
1100
TCCTCCACCG GTTCACCAAT CAGCAATCCC CGGAATCGGA TTCGCCTCAG 
1150
GTGAATTCTC TTCGGGTTTT CGCATACCAG CACGGTTTCA GGGCCAAGAA 
1200
GAGGAGCAGC ACGACGGTCT CACTCACAAG CCGTCCTCTG CTTCCTCTAT 
1250
TTCTCGCCAT TGA
1300

>AT3G15030.1 longest ORF length:420
MSDDQFHHPP PPSSMRHRST SDAADGGCGE IVEVQGGHIV RSTGRKDRHS 
50
KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GFDRPSKAVD WLIKKAKTSI 
100
DELAELPPWN PADAIRLAAA NAKPRRTTAK TQISPSPPPP QQQQQQQQLQ 
150
FGVGFNGGGA EHPSNNESSF LPPSMDSDSI ADTIKSFFPV IGSSTEAPSN 
200
HNLMHNYHHQ HPPDLLSRTN SQNQDLRLSL QSFPDGPPSL LHHQHHHHTS 
250
ASASEPTLFY GQSNPLGFDT SSWEQQSSEF GRIQRLVAWN SGGGGGATDT 
300
GNGGGFLFAP PTPSTTSFQP VLGQSQQLYS QRGPLQSSYS PMIRAWFDPH 
350
HHHQSISTDD LNHHHHLPPP VHQSAIPGIG FASGEFSSGF RIPARFQGQE 
400
EEQHDGLTHK PSSASSISRH 
450