fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G15030 (TCP4, MEE35)

Alias TCP4, MEE35
TF Classification
FioreDBTCP (Click to show phylogenetic tree)
RARTFTCP
AtTFDBTCP
PlnTFDBTCP (v3.0), TCP (v1.0)
DATFTCP
TAIR short description maternal effect embryo arrest 35, TCP family transcription factor 4 (.1.2.3)
TAIR annotation Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. (.1.2.3)
Gene model
Gene model cDNA support
AT3G15030.1 34
AT3G15030.3 29
AT3G15030.2 20
Entry clone (w/o stop) RE_0998_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45962: other biological processes ->positive regulation of development, heterochronic
(P) 48366: developmental processes ->leaf development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9793: developmental processes ->embryo development ending in seed dormancy
(P) 9965: developmental processes ->leaf morphogenesis
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR319a: 3'-TCCCTCGAGGGAAGTCAGGTT-5'
5'--3'

miR319b: 3'-TCCCTCGAGGGAAGTCAGGTT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1
rice
sorghum
physcomitrella
Total 2 1 3
Repression motif 
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Repression motif
in putative orthologs		 
SSQSQDLRLSLLSFQG at 214/408 in poplar Pt024326 (Type III)
SSQSQDLRLSLQSFQE at 218/414 in poplar Pt032683 (Type II)
DLGQQDLRLSLQSFQD at 203/371 in soybean Gm033704 (Type II)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication abnormal seedling, rough surface leaf, serrated leaf, abnormal shaped leaf, abnormal leaf, abnormal sepal, abnormal petal, abnormal shaped silique, sterile or low fertility, short root (PMID17307931)
CRES-T phenotype from bulk project serrated leaf, rough surface leaf (A20435-169)

Phenotype in ornamental plants
ID Species Construct Date Comment Phenotype Photo
ID41 Chrysanthemum 35S:AtCDS-SRDX 2005-08-18   serrated leaves, dark green leaves, defect of ray floret, disk floret and involucre 
Comment