fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G15270 SPL5 squamosa promoter binding protein-like 5 (.1)

>AT3G15270.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 407
PstI CTGCA|G 366


Click here to view TAIR data

>AT3G15270.1 length:546
ATGGAGGGTC AGAGAACACA ACGCCGGGGT TACTTGAAAG ACAAGGCTAC 
50
AGTCTCCAAC CTTGTTGAAG AAGAAATGGA GAATGGCATG GATGGAGAAG 
100
AGGAGGATGG AGGAGACGAA GACAAAAGGA AGAAGGTGAT GGAAAGAGTT 
150
AGAGGTCCTA GCACTGACCG TGTTCCATCG CGACTGTGCC AGGTCGATAG 
200
GTGCACTGTT AATTTGACTG AGGCCAAGCA GTATTACCGC AGACACAGAG 
250
TATGTGAAGT ACATGCAAAG GCATCTGCTG CGACTGTTGC AGGGGTCAGG 
300
CAACGCTTTT GTCAACAATG CAGCAGGTTT CATGAGCTAC CAGAGTTTGA 
350
TGAAGCTAAA AGAAGCTGCA GGAGGCGCTT AGCTGGACAC AATGAGAGGA 
400
GGAGGAAGAT CTCTGGTGAC AGTTTTGGAG AAGGGTCAGG CCGGAGAGGG 
450
TTTAGCGGTC AACTGATCCA GACTCAAGAA AGAAACAGGG TAGACAGGAA 
500
ACTTCCTATG ACCAACTCAT CATTCAAGCG ACCACAGATC AGATAA
550

>AT3G15270.1 longest ORF length:181
MEGQRTQRRG YLKDKATVSN LVEEEMENGM DGEEEDGGDE DKRKKVMERV 
50
RGPSTDRVPS RLCQVDRCTV NLTEAKQYYR RHRVCEVHAK ASAATVAGVR 
100
QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG 
150
FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R
200