Locus |
Common name |
Short description |
AT3G18010 |
WOX1 |
WUSCHEL related homeobox 1 (.1) |
>AT3G18010.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, ClaI, DraI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, Tth111I, XbaI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
93, 121, 318 |
AclI
| AA|CGTT |
358 |
AflIII
| A|CPuPyGT |
764 |
AgeI
| A|CCGGT |
207 |
AluI
| AG|CT |
54, 171, 218, 264, 324, 644, 948 |
AvaI
| C|PyCGPuG |
389 |
AvaII
| G|G[AT]CC |
440 |
BalI
| TGG|CCA |
426 |
BanII
| GPuGCPy|C |
219 |
BfaI
| C|TAG |
282, 690 |
BsaAI
| PyAC|GTPu |
666, 830 |
BsaBI
| GATNN|NNATC |
578 |
BsaJI
| C|CNNGG |
471 |
BsaWI
| [AT]|CCGG[AT] |
207 |
BsiEI
| CGPuPy|CG |
536 |
BsiHKAI
| G[AT]GC[AT]|C |
219, 610 |
BsiWI
| C|GTACG |
832 |
BsoBI
| C|PyCGPuG |
389 |
Bsp1286I
| G[GAT]GC[CAT]|C |
219, 610 |
BsrFI
| Pu|CCGGPy |
207 |
BsrI
| ACTGGN| |
424, 524 |
BssKI
| |CCNGG |
495 |
BstAPI
| GCANNNN|NTGC |
677 |
BstF5I
| GGATGNN| |
542 |
BstNI
| CC|[AT]GG |
495 |
BstYI
| Pu|GATCPy |
489 |
BtgI
| C|CPuPyGG |
471 |
BtrI
| CAC|GTC |
74 |
BtsI
| GCAGTGNN| |
138 |
Cac8I
| GCN|NGC |
591 |
Cfr10I
| [AG]|CCGG[TC] |
207 |
DdeI
| C|TNAG |
188, 960 |
DpnI
| GA-CH3|TC |
242, 488, 887, 926 |
DpnII
| |GATC |
242, 488, 887, 926 |
DraIII
| CACNNN|GTG |
666 |
EaeI
| Py|GGCCPu |
426 |
Fnu4HI
| GC|NGC |
96 |
HaeIII
| GG|CC |
425 |
HhaI
| GCG|C |
27 |
HinP1I
| G|CGC |
27 |
HindIII
| A|AGCTT |
55, 645 |
HinfI
| G|ANTC |
33, 230, 475 |
HpaII
| C|CGG |
206 |
Hpy188I
| TCN|GA |
114, 189, 233, 538 |
Hpy99I
| CG[AT]CG| |
330, 405 |
HpyCH4III
| ACN|GT |
224, 332, 438, 750, 804, 810, 916, 1018 |
HpyCH4IV
| A|CGT |
73, 357, 665, 724, 829 |
HpyCH4V
| TG|CA |
678 |
MboI
| |GATC |
242, 488, 887, 926 |
MscI
| TGG|CCA |
426 |
MseI
| T|TAA |
126, 248 |
MslI
| CAPyNN|NNPuTG |
869 |
MspI
| C|CGG |
206 |
MwoI
| GCNNNNN|NNGC |
179, 677, 789 |
NlaIII
| CATG| |
763, 899 |
NlaIV
| GGN|NCC |
371, 588 |
NspI
| PuCATG|Py |
764 |
PciI
| A|CATGT |
764 |
PmlI
| CAC|GTG |
666 |
PspGI
| |CC[AT]GG |
495 |
RsaI
| GT|AC |
334, 831 |
SacI
| GAGCT|C |
219 |
Sau3AI
| |GATC |
242, 488, 887, 926 |
Sau96I
| G|GNCC |
440 |
ScrFI
| CC|NGG |
495 |
SmlI
| C|TPyPuAG |
946 |
SnaBI
| TAC|GTA |
830 |
Taqƒ¿I
| T|CGA |
477, 865 |
TfiI
| G|A[AT]TC |
33, 230, 475 |
Tsp45I
| |GT[CG]AC |
141, 807 |
Tsp509I
| |AATT |
740, 921 |
TspRI
| NNCA[CG]TGNN| |
138, 960, 1019 |
XcmI
| CCANNNNN|NNNNTGG |
923 |
XmnI
| GAANN|NNTTC |
291 |
Click here to view TAIR data
>AT3G18010.1 length:1053
ATGTGGACGA TGGGTTACAA CGAAGGAGGC GCAGATTCCT TCAACGGAGG | 50 |
AAGAAAGCTT CGTCCTCTCA TCCCACGTCT CACTTCTTGC CCCACCGCCG | 100 |
CCGTAAACAC CAACTCCGAC CACCGCTTTA ATATGGCAGT GGTGACGATG | 150 |
ACGGCGGAGC AGAACAAGAG GGAGCTGATG ATGCTAAACT CAGAACCTCA | 200 |
ACATCCACCG GTAATGGTGA GCTCACGGTG GAATCCGACA CCAGATCAGT | 250 |
TAAGGGTTCT TGAAGAGCTT TACCGACAAG GAACTAGAAC TCCTTCTGCC | 300 |
GACCACATCC AACAAATCAC CGCACAGCTA CGACGGTACG GGAAGATAGA | 350 |
AGGCAAAAAC GTTTTCTATT GGTTCCAAAA CCACAAAGCC CGAGAACGCC | 400 |
AGAAACGACG GCGACAAATG GAAACTGGCC ACGAAGAAAC GGTCCTTTCA | 450 |
ACAGCAAGTC TTGTCTCAAA CCACGGATTC GACAAGAAAG ATCCTCCAGG | 500 |
TTACAAGGTT GAACAGGTCA AGAACTGGAT ATGTTCGGTC GGATGCGACA | 550 |
CGCAACCAGA GAAACCTTCC CGTGATTATC ATCTGGAGGA GCCAGCGAAT | 600 |
ATACGGGTGG AGCACAATGC TCGTTGTGGA GGAGACGAGA GACGAAGCTT | 650 |
TTTAGGGATA AACACCACGT GGCAGATGAT GCAGTTGCCA CCTAGTTTCT | 700 |
ACTCTTCTTC ACATCATCAT CATCAACGTA ACCTCATTCT CAATTCACCT | 750 |
ACTGTTTCCT CCAACATGTC CAACAGCAAC AATGCTGTCT CTGCTTCTAA | 800 |
AGATACGGTC ACGGTTTCAC CTGTATTTCT ACGTACGAGA GAAGCAACGA | 850 |
ACACAGAGAC TTGTCATCGA AATGGTGATG ATAATAAAGA TCAAGAACAA | 900 |
CATGAAGATT GCTCCAACGG TGAATTGGAT CATCAAGAAC AGACACTTGA | 950 |
GCTGTTTCCA CTGAGAAAAG AAGGGTTTTG TAGCGATGGT GAGAAAGACA | 1000 |
AGAACATTAG TGGCATTCAC TGTTTCTATG AGTTTCTGCC ATTGAAGAAC | 1050 |
TAA | 1100 |
>AT3G18010.1 longest ORF length:350
MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM | 50 |
TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA | 100 |
DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS | 150 |
TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN | 200 |
IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP | 250 |
TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ | 300 |
HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN | 350 |
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