fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G21330 bHLH087 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G21330.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 831
EcoRV GAT|ATC 822
HindIII A|AGCTT 592, 986, 1009
NheI G|CTAGC 238
PstI CTGCA|G 380
PvuII CAG|CTG 171
XhoI C|TCGAG 113


Click here to view TAIR data

>AT3G21330.1 length:1122
ATGGAAGGAT TGGAATCTGT GTACGCTCAA GCTATGTATG GAATGACACG 
50
AGAGAGCAAA ATCATGGAGC ATCAAGGATC AGATTTGATT TGGGGAGGAA 
100
ATGAGCTAAT GGCTCGAGAA CTCTGTTCTT CTTCTTCTTA TCACCACCAA 
150
CTCATTAATC CGAATCTTAG CAGCTGTTTC ATGTCTGATC TTGGAGTCTT 
200
AGGTGAGATT CAACAGCAGC AACATGTTGG CAACAGAGCT AGCTCGATAG 
250
ATCCATCATC ACTCGATTGT TTGTTATCTG CGACGTCGAA TAGCAACAAC 
300
ACCTCGACGG AGGACGATGA AGGAATATCT GTGCTTTTCT CAGATTGTCA 
350
GACTCTTTGG AGCTTTGGTG GAGTCTCATC TGCAGAGTCT GAGAACAGAG 
400
AGATCACTAC TGAGACGACA ACAACGATAA AGCCTAAGCC TTTGAAGAGA 
450
AACAGAGGAG GAGATGGAGG AACTACTGAG ACTACAACAA CAACAACAAA 
500
ACCTAAGTCT TTGAAGAGAA ACAGAGGAGA CGAGACAGGA AGTCACTTTA 
550
GTCTTGTTCA TCCTCAAGAT GATTCGGAGA AAGGAGGTTT CAAGCTTATA 
600
TACGATGAGA ATCAATCGAA ATCAAAGAAA CCAAGAACAG AGAAAGAACG 
650
AGGCGGTTCT TCGAACATTA GTTTCCAACA TTCAACTTGT TTGTCTGACA 
700
ATGTCGAGCC CGATGCTGAG GCGATTGCAC AAATGAAGGA GATGATATAC 
750
AGAGCGGCTG CATTTAGACC GGTGAATTTC GGGTTAGAGA TTGTGGAGAA 
800
GCCTAAGAGG AAGAACGTCA AGATATCGAC GGATCCTCAA ACGGTTGCAG 
850
CGAGACAGAG AAGGGAGAGG ATAAGTGAGA AGATTAGGGT TTTACAAACA 
900
TTGGTTCCAG GTGGGACGAA GATGGATACT GCATCAATGC TTGATGAAGC 
950
TGCTAATTAT CTCAAGTTCC TTAGAGCACA AGTAAAAGCT TTAGAAAACT 
1000
TGAGACCCAA GCTTGACCAA ACCAATCTCT CTTTCTCTTC TGCTCCTACA 
1050
TCGTTTCCAT TATTCCACCC ATCTTTTCTT CCATTGCAAA ATCCTAATCA 
1100
AATCCATCAT CCAGAGTGTT GA
1150

>AT3G21330.1 longest ORF length:373
MEGLESVYAQ AMYGMTRESK IMEHQGSDLI WGGNELMARE LCSSSSYHHQ 
50
LINPNLSSCF MSDLGVLGEI QQQQHVGNRA SSIDPSSLDC LLSATSNSNN 
100
TSTEDDEGIS VLFSDCQTLW SFGGVSSAES ENREITTETT TTIKPKPLKR 
150
NRGGDGGTTE TTTTTTKPKS LKRNRGDETG SHFSLVHPQD DSEKGGFKLI 
200
YDENQSKSKK PRTEKERGGS SNISFQHSTC LSDNVEPDAE AIAQMKEMIY 
250
RAAAFRPVNF GLEIVEKPKR KNVKISTDPQ TVAARQRRER ISEKIRVLQT 
300
LVPGGTKMDT ASMLDEAANY LKFLRAQVKA LENLRPKLDQ TNLSFSSAPT 
350
SFPLFHPSFL PLQNPNQIHH PEC
400